| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859276
Identifier: 85859276
GI number: 85859276
Start: 1463911
End: 1464384
Strand: Direct
Name: 85859276
Synonym: SYN_02159
Alternate gene names: NA
Gene position: 1463911-1464384 (Clockwise)
Preceding gene: 85859275
Following gene: 85859277
Centisome position: 46.05
GC content: 48.52
Gene sequence:
>474_bases ATGAAACGGTTCAGTTCATGTTTGAGGGGGCACGATAACCCGTCAGGACGTTGGATATCGGTTCTGTGGTTGATGGTTTT TATTCCGGGTTTGATAATGGGATGCGGTAAAAAAGCCGACCCCATGCCGCTCCGGTTGTCCGTGCCCCAGGTTGTTAATG ATTTACGGGCGGAGAGGACGGAAGAGGGAATTGTTCTGCAATGGACTGCAGCAATTTCTGAAGGAAGTTTTAGAATCCTG CGCAGCGAGCAATATCCCGAAGAAGAAATCTGCGTTGATTGTCCTCGAAATTATGTGGTCATTAGCGAGTTGACCGCGAA CGATCCCAAGGCAAAGAACAAAGGTTCCGGAGTAGATTATTCCTGGATCGATACCGCCGTGAAAAAAGAAAACCGATACG CTTATCAGGTTATTGTCTGCAATGCATCGGGATTCTGTGGCGGGCCGTCCAATATCGCGGATGCAGTCAAATGA
Upstream 100 bases:
>100_bases GCAGAAAAAGCTACGGGGGAACAGCGTGTCGGCAGGTCATGGAGCAGATCCGGCAGATAGAAGAAGGGGCTTATCCCTCA ACCAGGAGAAGAAAAGAAGC
Downstream 100 bases:
>100_bases TGATCAGTCAATATTTCTGCCTTGTCGAAAATCAGGGAAATCAGCCGGAGCTTGAAGAAAGAGCCTGGACGGTGCAATAA ATATGAATGATTTTCTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKRFSSCLRGHDNPSGRWISVLWLMVFIPGLIMGCGKKADPMPLRLSVPQVVNDLRAERTEEGIVLQWTAAISEGSFRIL RSEQYPEEEICVDCPRNYVVISELTANDPKAKNKGSGVDYSWIDTAVKKENRYAYQVIVCNASGFCGGPSNIADAVK
Sequences:
>Translated_157_residues MKRFSSCLRGHDNPSGRWISVLWLMVFIPGLIMGCGKKADPMPLRLSVPQVVNDLRAERTEEGIVLQWTAAISEGSFRIL RSEQYPEEEICVDCPRNYVVISELTANDPKAKNKGSGVDYSWIDTAVKKENRYAYQVIVCNASGFCGGPSNIADAVK >Mature_157_residues MKRFSSCLRGHDNPSGRWISVLWLMVFIPGLIMGCGKKADPMPLRLSVPQVVNDLRAERTEEGIVLQWTAAISEGSFRIL RSEQYPEEEICVDCPRNYVVISELTANDPKAKNKGSGVDYSWIDTAVKKENRYAYQVIVCNASGFCGGPSNIADAVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17442; Mature: 17442
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFSSCLRGHDNPSGRWISVLWLMVFIPGLIMGCGKKADPMPLRLSVPQVVNDLRAERT CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHC EEGIVLQWTAAISEGSFRILRSEQYPEEEICVDCPRNYVVISELTANDPKAKNKGSGVDY CCCEEEEEEEECCCCCEEEEECCCCCCHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCH SWIDTAVKKENRYAYQVIVCNASGFCGGPSNIADAVK HHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHCC >Mature Secondary Structure MKRFSSCLRGHDNPSGRWISVLWLMVFIPGLIMGCGKKADPMPLRLSVPQVVNDLRAERT CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHC EEGIVLQWTAAISEGSFRILRSEQYPEEEICVDCPRNYVVISELTANDPKAKNKGSGVDY CCCEEEEEEEECCCCCEEEEECCCCCCHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCH SWIDTAVKKENRYAYQVIVCNASGFCGGPSNIADAVK HHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA