Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
---|---|
Accession | NC_007759 |
Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859245
Identifier: 85859245
GI number: 85859245
Start: 1429163
End: 1429456
Strand: Direct
Name: 85859245
Synonym: SYN_00278
Alternate gene names: NA
Gene position: 1429163-1429456 (Clockwise)
Preceding gene: 85859244
Following gene: 85859246
Centisome position: 44.95
GC content: 44.9
Gene sequence:
>294_bases ATGAGTGATTCTGCAGAAAAGACACAGAAAGAAGTTAAGTTTAACCAGGATAACCTGTATCGGGAAGAGACAATCACCGA TCTCAGTGTTGGTTCTATTCGTATGCTGACCCCCATAAAAATTGATGGGACTGTTGACGCCAATCGCACCCCCCTTTTTA TCGGCCAGGCTCAGCTGATGTCACCGGAAGGTCCTATGCCTATTCAGTGTCCTATAGATGCAAAATCCCTGACTGAAGCC ATGGAAAAATTTCCCGAGTCCATGGAGTGGATGATGAAGCAAATTATCTCATAG
Upstream 100 bases:
>100_bases ATCTAACACGTCCTTTGAACAGGATTCTTTCGAACTCACCAATAAATTATTGATGTGAATATATAAACAAACCGATTATG TATAAGGAGTAGGAAAATTT
Downstream 100 bases:
>100_bases GGTAAAAAATGCAGAGCGGAAAATTAAGAAGTATTTTTCTGCAGTGCAAATAATATTTTGCACCATGAATATCATTTGCT CCTGGCAGTACGAGGGGAAA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSDSAEKTQKEVKFNQDNLYREETITDLSVGSIRMLTPIKIDGTVDANRTPLFIGQAQLMSPEGPMPIQCPIDAKSLTEA MEKFPESMEWMMKQIIS
Sequences:
>Translated_97_residues MSDSAEKTQKEVKFNQDNLYREETITDLSVGSIRMLTPIKIDGTVDANRTPLFIGQAQLMSPEGPMPIQCPIDAKSLTEA MEKFPESMEWMMKQIIS >Mature_96_residues SDSAEKTQKEVKFNQDNLYREETITDLSVGSIRMLTPIKIDGTVDANRTPLFIGQAQLMSPEGPMPIQCPIDAKSLTEAM EKFPESMEWMMKQIIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10954; Mature: 10823
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSAEKTQKEVKFNQDNLYREETITDLSVGSIRMLTPIKIDGTVDANRTPLFIGQAQLM CCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEECCCCCCCCCEEEECCCEEE SPEGPMPIQCPIDAKSLTEAMEKFPESMEWMMKQIIS CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDSAEKTQKEVKFNQDNLYREETITDLSVGSIRMLTPIKIDGTVDANRTPLFIGQAQLM CCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEECCCCCCCCCEEEECCCEEE SPEGPMPIQCPIDAKSLTEAMEKFPESMEWMMKQIIS CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA