Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85859246
Identifier: 85859246
GI number: 85859246
Start: 1429514
End: 1429681
Strand: Direct
Name: 85859246
Synonym: SYN_00277
Alternate gene names: NA
Gene position: 1429514-1429681 (Clockwise)
Preceding gene: 85859245
Following gene: 85859248
Centisome position: 44.96
GC content: 40.48
Gene sequence:
>168_bases TTGCACCATGAATATCATTTGCTCCTGGCAGTACGAGGGGAAATATCTCTTTCATTTCAATGGGCTGTTGCTGAATTCCT TGAAGGAAGAGTGGCTGCTTTTATTTGCATGAGCGAAAGAGAAAAATTTTCTTACCTTATGACTGAGACAAACAGAACCC GTCTGTAA
Upstream 100 bases:
>100_bases TCCCGAGTCCATGGAGTGGATGATGAAGCAAATTATCTCATAGGGTAAAAAATGCAGAGCGGAAAATTAAGAAGTATTTT TCTGCAGTGCAAATAATATT
Downstream 100 bases:
>100_bases TGCCTGCCATCCGTTCAGCCGTCTTTTTCCTGCTCTGCGTGTCTCTTACTATGGGAATGAGATCACCCGACGCACGTTGG CCGATCCTCCGGCTGTTTCC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MHHEYHLLLAVRGEISLSFQWAVAEFLEGRVAAFICMSEREKFSYLMTETNRTRL
Sequences:
>Translated_55_residues MHHEYHLLLAVRGEISLSFQWAVAEFLEGRVAAFICMSEREKFSYLMTETNRTRL >Mature_55_residues MHHEYHLLLAVRGEISLSFQWAVAEFLEGRVAAFICMSEREKFSYLMTETNRTRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6520; Mature: 6520
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHEYHLLLAVRGEISLSFQWAVAEFLEGRVAAFICMSEREKFSYLMTETNRTRL CCCCEEEEEEEECCEEEEEHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCC >Mature Secondary Structure MHHEYHLLLAVRGEISLSFQWAVAEFLEGRVAAFICMSEREKFSYLMTETNRTRL CCCCEEEEEEEECCEEEEEHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA