| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is flgL [H]
Identifier: 85859204
GI number: 85859204
Start: 1377134
End: 1378345
Strand: Direct
Name: flgL [H]
Synonym: SYN_02811
Alternate gene names: 85859204
Gene position: 1377134-1378345 (Clockwise)
Preceding gene: 85859203
Following gene: 85859205
Centisome position: 43.32
GC content: 45.54
Gene sequence:
>1212_bases GTGCTTATGGTTGTGCGGGTCACAGAAAACATGAAATATAATTCCATAATTGGAAATATCTTTACTGTTCAGAATGGATA TAACTGTATTATGGAAAAAATGTCTTCACAAAAGTCGATTAACAGAACATCGGATAATCCTATGGGTATGACTCGCATTT TTGATTTTCGGAAAACAAAGTCTTTTATAGAGCAATACAATCGAAATATCGATTCTGCAGATGCGTGGCTTTCATCGTCG GAATCCAAACTTTCCGCGGCTGGCGACCTGATATCCAAAGCAAGAGAAATAGCCGTGCGTGAGGCATCTTCCACCGCCAC CGAAACCAGCAGAAAACTATCAGCAGAAAACATTCAATCCCTTATTGATGAAATGCTTAGCCTTGCCAATTCAACCCTGA ATGGGAGGTATCTCTTTTCCGGTTCTGCGACGGATACGCCTCCTTTTTCAGCTTCCGAATTGCCGGCAAGGATTGAAGCC GCCGGGGGGGCGGAAGGAAATGAATTCCAGGGCACTGTTGAGTCTCAGGGGCACTTTACAGGGACATCGAACAAGACATT TGCTGTCAGGATTGACGAAGGTGGTCCTCTGGCTGAAGTTGAATACAGCATTTCTCTGGATGGCGGGAAATCATGGTGTG CCGGTAAAGACGATCTGAGTGCTGGAACCGTCGAACTGGGTGACGGTGTTCAGATGGCGTTTGATGATGATGGGGGGGCC AAGCCTTTGTCGAACGGAGACCTGTTTTATGTCAAATCCTATGCCGCTGGTTATTACTGTGGAAATAACGAAAAGTTGTC TGTCGATGTTCAAAGGGATTCACCGGTAACATACAACTTGACCGGTCAGGAAGTGTTTACTGGAGTGGGCAGCGATGGAG TTGATATTTTCAAGTGCCTTGCCGATTTGAAGAAAGCCATGCAGAACAGTGATCAGCAGAGCATACAGGCTCAAATCGGA AATCTTGAAAAAGCTCAGAATCAGATTACGTTAAATGTGTCGAAATGCGGTACCCGGCAAAATCGTCTGGAAATCGCCGA AAGCAATCTGGCCGATCTTGAACTTAAAGTAACGGAACTGATGTCGAATATCGAAGACGCAGACTTAACCCAACTCGTGA CCCAGTTTACCATGAAAGAAGTCTCCCTGAAGGCTTGCTATGCCATCGCTTCAGAGATCGGTAATACCTCAGTTCTGGAT TTCCTCAAGTAG
Upstream 100 bases:
>100_bases CGGCTCTGTTCCATTATAAATGAGATGCTGGATACGTTAATCAATCTGGGAAGATAAATTGAAGATTATAATTACTTGAG CTGATAGTTGATGAAGAGGT
Downstream 100 bases:
>100_bases AAAAAAGGTTTTTTAATGCTCATCCTGACAAGGAAGTTGGGAGAATCCATCGTAATAGGCGATCAGATACAAATTACCCT TCTGGATATTAAAGGAAAAC
Product: flagellin and related hook-associated proteins
Products: NA
Alternate protein names: HAP3 [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MLMVVRVTENMKYNSIIGNIFTVQNGYNCIMEKMSSQKSINRTSDNPMGMTRIFDFRKTKSFIEQYNRNIDSADAWLSSS ESKLSAAGDLISKAREIAVREASSTATETSRKLSAENIQSLIDEMLSLANSTLNGRYLFSGSATDTPPFSASELPARIEA AGGAEGNEFQGTVESQGHFTGTSNKTFAVRIDEGGPLAEVEYSISLDGGKSWCAGKDDLSAGTVELGDGVQMAFDDDGGA KPLSNGDLFYVKSYAAGYYCGNNEKLSVDVQRDSPVTYNLTGQEVFTGVGSDGVDIFKCLADLKKAMQNSDQQSIQAQIG NLEKAQNQITLNVSKCGTRQNRLEIAESNLADLELKVTELMSNIEDADLTQLVTQFTMKEVSLKACYAIASEIGNTSVLD FLK
Sequences:
>Translated_403_residues MLMVVRVTENMKYNSIIGNIFTVQNGYNCIMEKMSSQKSINRTSDNPMGMTRIFDFRKTKSFIEQYNRNIDSADAWLSSS ESKLSAAGDLISKAREIAVREASSTATETSRKLSAENIQSLIDEMLSLANSTLNGRYLFSGSATDTPPFSASELPARIEA AGGAEGNEFQGTVESQGHFTGTSNKTFAVRIDEGGPLAEVEYSISLDGGKSWCAGKDDLSAGTVELGDGVQMAFDDDGGA KPLSNGDLFYVKSYAAGYYCGNNEKLSVDVQRDSPVTYNLTGQEVFTGVGSDGVDIFKCLADLKKAMQNSDQQSIQAQIG NLEKAQNQITLNVSKCGTRQNRLEIAESNLADLELKVTELMSNIEDADLTQLVTQFTMKEVSLKACYAIASEIGNTSVLD FLK >Mature_403_residues MLMVVRVTENMKYNSIIGNIFTVQNGYNCIMEKMSSQKSINRTSDNPMGMTRIFDFRKTKSFIEQYNRNIDSADAWLSSS ESKLSAAGDLISKAREIAVREASSTATETSRKLSAENIQSLIDEMLSLANSTLNGRYLFSGSATDTPPFSASELPARIEA AGGAEGNEFQGTVESQGHFTGTSNKTFAVRIDEGGPLAEVEYSISLDGGKSWCAGKDDLSAGTVELGDGVQMAFDDDGGA KPLSNGDLFYVKSYAAGYYCGNNEKLSVDVQRDSPVTYNLTGQEVFTGVGSDGVDIFKCLADLKKAMQNSDQQSIQAQIG NLEKAQNQITLNVSKCGTRQNRLEIAESNLADLELKVTELMSNIEDADLTQLVTQFTMKEVSLKACYAIASEIGNTSVLD FLK
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=147, Percent_Identity=31.9727891156463, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 43680; Mature: 43680
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMVVRVTENMKYNSIIGNIFTVQNGYNCIMEKMSSQKSINRTSDNPMGMTRIFDFRKTK CEEEEEECCCCEEHHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH SFIEQYNRNIDSADAWLSSSESKLSAAGDLISKAREIAVREASSTATETSRKLSAENIQS HHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LIDEMLSLANSTLNGRYLFSGSATDTPPFSASELPARIEAAGGAEGNEFQGTVESQGHFT HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCEEE GTSNKTFAVRIDEGGPLAEVEYSISLDGGKSWCAGKDDLSAGTVELGDGVQMAFDDDGGA CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCC KPLSNGDLFYVKSYAAGYYCGNNEKLSVDVQRDSPVTYNLTGQEVFTGVGSDGVDIFKCL CCCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCEEEEECHHHHHCCCCCCHHHHHHHH ADLKKAMQNSDQQSIQAQIGNLEKAQNQITLNVSKCGTRQNRLEIAESNLADLELKVTEL HHHHHHHHCCHHHHHHHHHCCHHHCCCEEEEEHHHCCCCCHHHHHHCCCCCHHEEEHHHH MSNIEDADLTQLVTQFTMKEVSLKACYAIASEIGNTSVLDFLK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC >Mature Secondary Structure MLMVVRVTENMKYNSIIGNIFTVQNGYNCIMEKMSSQKSINRTSDNPMGMTRIFDFRKTK CEEEEEECCCCEEHHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH SFIEQYNRNIDSADAWLSSSESKLSAAGDLISKAREIAVREASSTATETSRKLSAENIQS HHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LIDEMLSLANSTLNGRYLFSGSATDTPPFSASELPARIEAAGGAEGNEFQGTVESQGHFT HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCEEE GTSNKTFAVRIDEGGPLAEVEYSISLDGGKSWCAGKDDLSAGTVELGDGVQMAFDDDGGA CCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCC KPLSNGDLFYVKSYAAGYYCGNNEKLSVDVQRDSPVTYNLTGQEVFTGVGSDGVDIFKCL CCCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCEEEEECHHHHHCCCCCCHHHHHHHH ADLKKAMQNSDQQSIQAQIGNLEKAQNQITLNVSKCGTRQNRLEIAESNLADLELKVTEL HHHHHHHHCCHHHHHHHHHCCHHHCCCEEEEEHHHCCCCCHHHHHHCCCCCHHEEEHHHH MSNIEDADLTQLVTQFTMKEVSLKACYAIASEIGNTSVLDFLK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]