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The map label for this gene is flgF [H]

Identifier: 85859195

GI number: 85859195

Start: 1369929

End: 1370696

Strand: Direct

Name: flgF [H]

Synonym: SYN_02820

Alternate gene names: 85859195

Gene position: 1369929-1370696 (Clockwise)

Preceding gene: 85859194

Following gene: 85859196

Centisome position: 43.09

GC content: 42.45

Gene sequence:

>768_bases
TTGGTATGCAAATTGAAATATCTAAATGAAAAAACCGCTGGAGCATATGGTATGAGGACTTATGGTATTGCAGATGTAGG
AAACGCCTGTTTGAGAACAATGGCAAAACTCGACTGTTCAGCAAATAACATTGCCAATGTCAGCACACCTGGCTTCAAGG
TAGAATTTTTAAATTATTTGATGAGAGATTCAGGCCGCTCGTCGAACGACAAGGCGCCTTCGTATGATGAGTTGTTGACC
AGGGATTATTCGTCAGGCGCCCTTCAGAGAACGGACAATCCCCTGGAAGTTGCCCTCCTGGGAGAAGGGTTTTTCATTAT
CCAGACAGCGAAAGGAGTTGCTTATACAAGAAGGGGGGACTTTACGTTAAATATGAAACGAGAACTGGTCACAAAATCGG
GTGATCCGGTCCTGGGTAAGACAGGAACAATCGTTTTGAATGGTGAAGATGTTCGCATCGATGAATCAGGTAATGTCCAT
ATAGGTGAAAATCAGGTAGGCCAGTTGAAAATCGTCAGCTTCAAAAACCCTGAGGTGTTGACTTCTTCGGGCGAGGGAAT
CTTCAGAGATGAAGGAAAGGGGATATTTCAGGAAAATTTTACACCGAAGGTCGTCTATGGATCTCTTGAACTTTCCAATG
TCAGTGCAATAAAGGAAATGATTCAAATGATCGACCTGCAACGAACATTTGAAACTTATCAAAAGCTTATCCATTCCATT
GATGAACAGGATAAACTTTCAGCAGGTAGAATCGGGAAAGTAGGATAA

Upstream 100 bases:

>100_bases
TATCCTTTTTTGAACGTCAAATTCTTCTCTATAGTCAATTATGCTGTTATTTAAAAAGAATAGAAGAATAGCGAGAACCG
GAAACTTATTCTAATGCCGG

Downstream 100 bases:

>100_bases
ATAATTTGCAGGAGGAATCGTAATGATCAGATCGCTTTGGACGGCAGCGACAGGAATGCAGGCTCAGCAAGTTGAGCAGG
ATGTGGTGGCGAACAATCTG

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MVCKLKYLNEKTAGAYGMRTYGIADVGNACLRTMAKLDCSANNIANVSTPGFKVEFLNYLMRDSGRSSNDKAPSYDELLT
RDYSSGALQRTDNPLEVALLGEGFFIIQTAKGVAYTRRGDFTLNMKRELVTKSGDPVLGKTGTIVLNGEDVRIDESGNVH
IGENQVGQLKIVSFKNPEVLTSSGEGIFRDEGKGIFQENFTPKVVYGSLELSNVSAIKEMIQMIDLQRTFETYQKLIHSI
DEQDKLSAGRIGKVG

Sequences:

>Translated_255_residues
MVCKLKYLNEKTAGAYGMRTYGIADVGNACLRTMAKLDCSANNIANVSTPGFKVEFLNYLMRDSGRSSNDKAPSYDELLT
RDYSSGALQRTDNPLEVALLGEGFFIIQTAKGVAYTRRGDFTLNMKRELVTKSGDPVLGKTGTIVLNGEDVRIDESGNVH
IGENQVGQLKIVSFKNPEVLTSSGEGIFRDEGKGIFQENFTPKVVYGSLELSNVSAIKEMIQMIDLQRTFETYQKLIHSI
DEQDKLSAGRIGKVG
>Mature_255_residues
MVCKLKYLNEKTAGAYGMRTYGIADVGNACLRTMAKLDCSANNIANVSTPGFKVEFLNYLMRDSGRSSNDKAPSYDELLT
RDYSSGALQRTDNPLEVALLGEGFFIIQTAKGVAYTRRGDFTLNMKRELVTKSGDPVLGKTGTIVLNGEDVRIDESGNVH
IGENQVGQLKIVSFKNPEVLTSSGEGIFRDEGKGIFQENFTPKVVYGSLELSNVSAIKEMIQMIDLQRTFETYQKLIHSI
DEQDKLSAGRIGKVG

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=244, Percent_Identity=32.7868852459016, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787318, Length=238, Percent_Identity=31.9327731092437, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 28028; Mature: 28028

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCKLKYLNEKTAGAYGMRTYGIADVGNACLRTMAKLDCSANNIANVSTPGFKVEFLNYL
CEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
MRDSGRSSNDKAPSYDELLTRDYSSGALQRTDNPLEVALLGEGFFIIQTAKGVAYTRRGD
HHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCC
FTLNMKRELVTKSGDPVLGKTGTIVLNGEDVRIDESGNVHIGENQVGQLKIVSFKNPEVL
EEEEEHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCEEECCCCCCEEEEEEECCCCEE
TSSGEGIFRDEGKGIFQENFTPKVVYGSLELSNVSAIKEMIQMIDLQRTFETYQKLIHSI
ECCCCEEEECCCCCCHHCCCCCEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEQDKLSAGRIGKVG
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MVCKLKYLNEKTAGAYGMRTYGIADVGNACLRTMAKLDCSANNIANVSTPGFKVEFLNYL
CEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
MRDSGRSSNDKAPSYDELLTRDYSSGALQRTDNPLEVALLGEGFFIIQTAKGVAYTRRGD
HHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCC
FTLNMKRELVTKSGDPVLGKTGTIVLNGEDVRIDESGNVHIGENQVGQLKIVSFKNPEVL
EEEEEHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCEEECCCCCCEEEEEEECCCCEE
TSSGEGIFRDEGKGIFQENFTPKVVYGSLELSNVSAIKEMIQMIDLQRTFETYQKLIHSI
ECCCCEEEECCCCCCHHCCCCCEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEQDKLSAGRIGKVG
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]