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The map label for this gene is ylqH [H]

Identifier: 85859194

GI number: 85859194

Start: 1369265

End: 1369543

Strand: Direct

Name: ylqH [H]

Synonym: SYN_02821

Alternate gene names: 85859194

Gene position: 1369265-1369543 (Clockwise)

Preceding gene: 85859193

Following gene: 85859195

Centisome position: 43.07

GC content: 43.73

Gene sequence:

>279_bases
ATGAAAAAAGTACAACTTGCCGCAGCAATAAGATATGATGGAACCGTTGATGTTGCGCCGAAAGTGACTGCCAAAGGGTG
CGGGTTTGTTGCCGAGAAGATTATAGAACTGGCTCAGAAAAACAATATTCCCGTCAGGAATGATCCCGGCCTTGTGCAGA
TACTCTGCAGACTGGACATTGATGAACAGATTCCGGAGGATTTGTATAAAGCCGTAGCCGAAATCCTTGCCTATGTTTAT
TCCATCAACTCCAAGTTGAGTCAAAAAAAAGAGGTTTGA

Upstream 100 bases:

>100_bases
GCTTTGCCTGAATTGGCTGATGTGGCTGTGTTGAGGGAATGACATTCAAAACGATGAATTTAAGATAGTCGTGTGAAGAA
GAACGGAGTAGAAGAGTAAA

Downstream 100 bases:

>100_bases
CAGCAGGGGAAATATTTTCCCGGATTTCTTCAGCCCACTCAGAAATTCCTTCATTGTTTGCCTATCGATCCCTTCGACAA
GAAGGGTTGGCCTTCTTTTT

Product: flagellar biosynthetic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKKVQLAAAIRYDGTVDVAPKVTAKGCGFVAEKIIELAQKNNIPVRNDPGLVQILCRLDIDEQIPEDLYKAVAEILAYVY
SINSKLSQKKEV

Sequences:

>Translated_92_residues
MKKVQLAAAIRYDGTVDVAPKVTAKGCGFVAEKIIELAQKNNIPVRNDPGLVQILCRLDIDEQIPEDLYKAVAEILAYVY
SINSKLSQKKEV
>Mature_92_residues
MKKVQLAAAIRYDGTVDVAPKVTAKGCGFVAEKIIELAQKNNIPVRNDPGLVQILCRLDIDEQIPEDLYKAVAEILAYVY
SINSKLSQKKEV

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788188, Length=77, Percent_Identity=45.4545454545455, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 10174; Mature: 10174

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVQLAAAIRYDGTVDVAPKVTAKGCGFVAEKIIELAQKNNIPVRNDPGLVQILCRLDI
CCCCHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
DEQIPEDLYKAVAEILAYVYSINSKLSQKKEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVQLAAAIRYDGTVDVAPKVTAKGCGFVAEKIIELAQKNNIPVRNDPGLVQILCRLDI
CCCCHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
DEQIPEDLYKAVAEILAYVYSINSKLSQKKEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]