| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859193
Identifier: 85859193
GI number: 85859193
Start: 1368000
End: 1369175
Strand: Direct
Name: 85859193
Synonym: SYN_02822
Alternate gene names: NA
Gene position: 1368000-1369175 (Clockwise)
Preceding gene: 85859192
Following gene: 85859194
Centisome position: 43.03
GC content: 38.95
Gene sequence:
>1176_bases ATGATAACGTCGCATACAATGGAAATATCGCCTAATGTCCCAACTGCATTTTCCAATCCTGTTCAGGTTATCAAAAATCC TGCCGATATCTCATCCTTCCGCCTCGGGGATGTGGTGCAGGCACTGGTTCTGGAGAAGCTGAGCAGTAAAGAAGTGCTGC TCGCTGTAAAGGAATCTGAAATTGCTGCTCAATCAGCTCTTCCATTGAACGTGGGAGATCGTCTGCTTCTTCAGGTTGCA AAAACTCACCCCATGATAGTTCTTAAACTCATCATTCCGGATGATTCGGAAACGCTTGAATTTCGAAATAATTTAGTCCT GTTTCGGTCATTCCCCGAAGGGTTGTTTAATGTGGTGAAAAATGGTCTTGAGATATTTCAGGGGAATATACAACCAGTTT ATCAATTTCTCAATCAAGCGGACATCGATGCCTTTCTTAAAATTCTCAATACTCTCATTTATTCTGAGAAAAGCCTGACG AGCCCTCTTTTTTTAAAAGAGTTTATTATGAATATCGGTTACTTGATGGAAAAAAACCTCAAGAAGTCTCTTGATCGGAC ACATGAAAAAGGAAATGACTTAAAGAAAGGGGTGGACAAAAATATTAAAAGCATTTTAGCCAGGCTTTCCTGCCAACTCC ATCAGATTATGGATAACGCTATGGATTCGGATTTAGATCCCATGCTGTTGAAATCATTGAAGAGCCTGTCGGATTATACG GCTGATTCATTGAAAATGATTTATAATCAGCAAGTTGTAAATGTGTTCAGCCAGGAAGAGCAGCAGGGATATTATTTCCA GCTTCCGATTAAGTTCGCTGACAACCTGAGGATGGTGGATCTCTTTATCAGGTTGAACAACGCTAATAAGAAAAAAACGG GAATGGTTAAACAATTTCAATTTGTTTTGTTTTTTAATATGGATCCATTGGGAGATCTTATTGTGGACGTCAGATATATG AATAAAAAAATATGGGGACTTTTTAAATGTGACCGATCCGAATCACGTGATTTTCTTTCTGATTTTATAGAGACCTTGAA TGAACGCCTTATTTTGTCGGGATATGGCCCAAATTCTTTCAACATCCAACTTTCCAGGGATCTTTCGAGAGAAAGGTCTG ACTATTTGAAAGATACCGTGATCTATTCAAAAAAGATCGTTAACTGCTTTGCCTGA
Upstream 100 bases:
>100_bases TGGCCCGGCAAGGTCTGGATGAAGAACAAATCGCTCATCAATCAGGACTGCCCGAAGGTGAAGTTGATCTGATTCTCAAC CTCGCCCGAGAGAAAAGTTC
Downstream 100 bases:
>100_bases ATTGGCTGATGTGGCTGTGTTGAGGGAATGACATTCAAAACGATGAATTTAAGATAGTCGTGTGAAGAAGAACGGAGTAG AAGAGTAAAATGAAAAAAGT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESEIAAQSALPLNVGDRLLLQVA KTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVKNGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLT SPLFLKEFIMNIGYLMEKNLKKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQFVLFFNMDPLGDLIVDVRYM NKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSFNIQLSRDLSRERSDYLKDTVIYSKKIVNCFA
Sequences:
>Translated_391_residues MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESEIAAQSALPLNVGDRLLLQVA KTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVKNGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLT SPLFLKEFIMNIGYLMEKNLKKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQFVLFFNMDPLGDLIVDVRYM NKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSFNIQLSRDLSRERSDYLKDTVIYSKKIVNCFA >Mature_391_residues MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESEIAAQSALPLNVGDRLLLQVA KTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVKNGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLT SPLFLKEFIMNIGYLMEKNLKKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQFVLFFNMDPLGDLIVDVRYM NKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSFNIQLSRDLSRERSDYLKDTVIYSKKIVNCFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44769; Mature: 44769
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESE CCCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH IAAQSALPLNVGDRLLLQVAKTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVK HHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCEEEEECCHHHHHHHHH NGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLTSPLFLKEFIMNIGYLMEKNL HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCEEEEEEEEECCCCCHHHHHHHHEE FVLFFNMDPLGDLIVDVRYMNKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSF EEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCE NIQLSRDLSRERSDYLKDTVIYSKKIVNCFA EEEECHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITSHTMEISPNVPTAFSNPVQVIKNPADISSFRLGDVVQALVLEKLSSKEVLLAVKESE CCCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH IAAQSALPLNVGDRLLLQVAKTHPMIVLKLIIPDDSETLEFRNNLVLFRSFPEGLFNVVK HHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCEEEEECCHHHHHHHHH NGLEIFQGNIQPVYQFLNQADIDAFLKILNTLIYSEKSLTSPLFLKEFIMNIGYLMEKNL HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KKSLDRTHEKGNDLKKGVDKNIKSILARLSCQLHQIMDNAMDSDLDPMLLKSLKSLSDYT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ADSLKMIYNQQVVNVFSQEEQQGYYFQLPIKFADNLRMVDLFIRLNNANKKKTGMVKQFQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCEEEEEEEEECCCCCHHHHHHHHEE FVLFFNMDPLGDLIVDVRYMNKKIWGLFKCDRSESRDFLSDFIETLNERLILSGYGPNSF EEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCE NIQLSRDLSRERSDYLKDTVIYSKKIVNCFA EEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA