| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858366
Identifier: 85858366
GI number: 85858366
Start: 531490
End: 531852
Strand: Direct
Name: 85858366
Synonym: SYN_03367
Alternate gene names: NA
Gene position: 531490-531852 (Clockwise)
Preceding gene: 85858365
Following gene: 85858367
Centisome position: 16.72
GC content: 60.61
Gene sequence:
>363_bases ATGCCGGGAGTGAAGGGAATGAAACAGAAACCCGCCCTCTATTCGGCGCGGCAGAAAATGTGGACGACGATCCGGATCAA GCGGCGCTTCGATATCCGGGACCTGCTGATCACCGTGCCGGGGGCGAAAGCGGACAACGCCCGCAAGCTGCTCAACCTGC TGGAAAAGGAAGGATACATCACCGCCATCGGCGGGTACGTTACCGGCCGGGGAGGCAACTATAAAGGATACCGGCTCGTA AAGGACGCCGGTCCGGAATGCCCGGTGAAATCGCCGTCCGTCCCGGCGCGGAAAAAAGAAGGACGGGAGGAGAGGCATCA TGCCGCAAGAGGATCGCATCGCGCTGCTGCTGCGCACTATTGA
Upstream 100 bases:
>100_bases AGATGGCGAAGACTTCGGGGCTGGAGACGGTAACCCTTGACGACTGGGCGGATCGCCCTCTGTACTTCGATCAGCCGAAG TTCCGGAAGAGGGGGTAGCC
Downstream 100 bases:
>100_bases GGAAAAGGGGCAGGCCGCCACGGCGCGGGCCCTTGGCGTTTCGGCCTCCGCCCTCTCCCAGATCCGCAAAGGCACCTACG GGGCGGACATGTCCCGGATA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPGVKGMKQKPALYSARQKMWTTIRIKRRFDIRDLLITVPGAKADNARKLLNLLEKEGYITAIGGYVTGRGGNYKGYRLV KDAGPECPVKSPSVPARKKEGREERHHAARGSHRAAAAHY
Sequences:
>Translated_120_residues MPGVKGMKQKPALYSARQKMWTTIRIKRRFDIRDLLITVPGAKADNARKLLNLLEKEGYITAIGGYVTGRGGNYKGYRLV KDAGPECPVKSPSVPARKKEGREERHHAARGSHRAAAAHY >Mature_119_residues PGVKGMKQKPALYSARQKMWTTIRIKRRFDIRDLLITVPGAKADNARKLLNLLEKEGYITAIGGYVTGRGGNYKGYRLVK DAGPECPVKSPSVPARKKEGREERHHAARGSHRAAAAHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13356; Mature: 13225
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVKGMKQKPALYSARQKMWTTIRIKRRFDIRDLLITVPGAKADNARKLLNLLEKEGYI CCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCE TAIGGYVTGRGGNYKGYRLVKDAGPECPVKSPSVPARKKEGREERHHAARGSHRAAAAHY EEECCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PGVKGMKQKPALYSARQKMWTTIRIKRRFDIRDLLITVPGAKADNARKLLNLLEKEGYI CCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCCE TAIGGYVTGRGGNYKGYRLVKDAGPECPVKSPSVPARKKEGREERHHAARGSHRAAAAHY EEECCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA