| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858303
Identifier: 85858303
GI number: 85858303
Start: 472931
End: 473743
Strand: Direct
Name: 85858303
Synonym: SYN_02612
Alternate gene names: NA
Gene position: 472931-473743 (Clockwise)
Preceding gene: 85858302
Following gene: 85858308
Centisome position: 14.88
GC content: 59.53
Gene sequence:
>813_bases ATGAACCCTTCAGAAGAAAACGAACAAGCCATTCTTCATACCCCGGAAGACATCCGGATTTTTAGGGAGATTGCTGGTAT GCCGGTGCGCGGCGGAGGCTGTGATTTTTCCTCCGGCGCCGGCATTGCGGCTGCGGGGCTCGCCTTTCTGGGCAGGCCGT ATGGGGCGCATACGCTGGAAGGGGAAGGACCGGAGCGGCTGGTCATCAATCTACGGGAGCTGGACTGTTTTACCCTGGTG GAAAATGCCGTGGTTCTGGAGCGGCTGTTTCGGACCGGAGCGACGGGGTTTCCCGATTATGCCGCGACTCTGAGGCGATT GCGCTATCGGAACGGAATCCTGGACGGTTTTGCCTCCCGGCTCCATTATTTTTCGGACTGGCTTTTCGATGCCGGGGCGA AGGGATTTCTCCGTGATGTGACGGCGGACCTGGGGGGGCAGTGGCTGGTCAAGTCGATTTCTTACATGACGGATCACCCG GAACGTTATCCCGCCCTCGAAGACGAAGAAACCTTCCTGCGGTTGAGGGAGATCGAGGGGCGCCTGTCCGCGCGGCCACT GGTTTTCCTTCCCCGGGAGAAGCTGAGGAGAGTCGAGGATCGGTTCCAGGACGGCGATATCCTGGCGATCACGACCGGCA AGGGCGGCATGGATGTAGTCCATGCGGGGATCGCCCTCCGCCTGCGACGCCGGGTCCACTTTCTCCATGCTTCGAGCCTT GCCGGAAAGGTGCTGATCAGCCCGGAAACGCTTTATGGATACCTGATGAAAAAGAAGGGGCGCACCGGGGTGATCGTGGC AAGAGTCGTTTAA
Upstream 100 bases:
>100_bases TGCAACATTGAGGTTGCGTTCAGAGGATTCCAGAGCATAATGGTGCTGCCTGTTCCATCAGGAAGCTTGAAAGGAATGGA ATCGCGGGAGAAAAAATTTC
Downstream 100 bases:
>100_bases CGACACCCCGGCGCGCCCACGGAATCAGGTTAAACCTTGAAGCTCGAACTTTGAACCTTCACCGTTTATCCCTTGATCAT GATCAGCAGCATCTTGAACG
Product: cytoplasmic protein
Products: NA
Alternate protein names: Lipoprotein; Inner Membrane Protein; Cytoplasmic Protein
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNPSEENEQAILHTPEDIRIFREIAGMPVRGGGCDFSSGAGIAAAGLAFLGRPYGAHTLEGEGPERLVINLRELDCFTLV ENAVVLERLFRTGATGFPDYAATLRRLRYRNGILDGFASRLHYFSDWLFDAGAKGFLRDVTADLGGQWLVKSISYMTDHP ERYPALEDEETFLRLREIEGRLSARPLVFLPREKLRRVEDRFQDGDILAITTGKGGMDVVHAGIALRLRRRVHFLHASSL AGKVLISPETLYGYLMKKKGRTGVIVARVV
Sequences:
>Translated_270_residues MNPSEENEQAILHTPEDIRIFREIAGMPVRGGGCDFSSGAGIAAAGLAFLGRPYGAHTLEGEGPERLVINLRELDCFTLV ENAVVLERLFRTGATGFPDYAATLRRLRYRNGILDGFASRLHYFSDWLFDAGAKGFLRDVTADLGGQWLVKSISYMTDHP ERYPALEDEETFLRLREIEGRLSARPLVFLPREKLRRVEDRFQDGDILAITTGKGGMDVVHAGIALRLRRRVHFLHASSL AGKVLISPETLYGYLMKKKGRTGVIVARVV >Mature_270_residues MNPSEENEQAILHTPEDIRIFREIAGMPVRGGGCDFSSGAGIAAAGLAFLGRPYGAHTLEGEGPERLVINLRELDCFTLV ENAVVLERLFRTGATGFPDYAATLRRLRYRNGILDGFASRLHYFSDWLFDAGAKGFLRDVTADLGGQWLVKSISYMTDHP ERYPALEDEETFLRLREIEGRLSARPLVFLPREKLRRVEDRFQDGDILAITTGKGGMDVVHAGIALRLRRRVHFLHASSL AGKVLISPETLYGYLMKKKGRTGVIVARVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30102; Mature: 30102
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSEENEQAILHTPEDIRIFREIAGMPVRGGGCDFSSGAGIAAAGLAFLGRPYGAHTLE CCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC GEGPERLVINLRELDCFTLVENAVVLERLFRTGATGFPDYAATLRRLRYRNGILDGFASR CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LHYFSDWLFDAGAKGFLRDVTADLGGQWLVKSISYMTDHPERYPALEDEETFLRLREIEG HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHH RLSARPLVFLPREKLRRVEDRFQDGDILAITTGKGGMDVVHAGIALRLRRRVHFLHASSL HCCCCCEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC AGKVLISPETLYGYLMKKKGRTGVIVARVV CCEEEECHHHHHHHHHHCCCCCEEEEEEEC >Mature Secondary Structure MNPSEENEQAILHTPEDIRIFREIAGMPVRGGGCDFSSGAGIAAAGLAFLGRPYGAHTLE CCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC GEGPERLVINLRELDCFTLVENAVVLERLFRTGATGFPDYAATLRRLRYRNGILDGFASR CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LHYFSDWLFDAGAKGFLRDVTADLGGQWLVKSISYMTDHPERYPALEDEETFLRLREIEG HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHH RLSARPLVFLPREKLRRVEDRFQDGDILAITTGKGGMDVVHAGIALRLRRRVHFLHASSL HCCCCCEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC AGKVLISPETLYGYLMKKKGRTGVIVARVV CCEEEECHHHHHHHHHHCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA