| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858302
Identifier: 85858302
GI number: 85858302
Start: 472771
End: 472995
Strand: Direct
Name: 85858302
Synonym: SYN_02611
Alternate gene names: NA
Gene position: 472771-472995 (Clockwise)
Preceding gene: 85858301
Following gene: 85858303
Centisome position: 14.87
GC content: 47.56
Gene sequence:
>225_bases TTGCAGACGGAGAAACCTGCCCGTGACCGTTTTTGCGCCAGGAGGAATTTATTCCTCGCCTGCAACATTGAGGTTGCGTT CAGAGGATTCCAGAGCATAATGGTGCTGCCTGTTCCATCAGGAAGCTTGAAAGGAATGGAATCGCGGGAGAAAAAATTTC ATGAACCCTTCAGAAGAAAACGAACAAGCCATTCTTCATACCCCGGAAGACATCCGGATTTTTAG
Upstream 100 bases:
>100_bases AGCCCCCGGCGGGGAAATTCAGGGGCTTCCCTCGCGCGGGTTGCAGACGGGACGCAAATCAGATTGAAAAACTGGTGACC TCGGCTCCTTCTCGCTCAGG
Downstream 100 bases:
>100_bases GGAGATTGCTGGTATGCCGGTGCGCGGCGGAGGCTGTGATTTTTCCTCCGGCGCCGGCATTGCGGCTGCGGGGCTCGCCT TTCTGGGCAGGCCGTATGGG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MQTEKPARDRFCARRNLFLACNIEVAFRGFQSIMVLPVPSGSLKGMESREKKFHEPFRRKRTSHSSYPGRHPDF
Sequences:
>Translated_74_residues MQTEKPARDRFCARRNLFLACNIEVAFRGFQSIMVLPVPSGSLKGMESREKKFHEPFRRKRTSHSSYPGRHPDF >Mature_74_residues MQTEKPARDRFCARRNLFLACNIEVAFRGFQSIMVLPVPSGSLKGMESREKKFHEPFRRKRTSHSSYPGRHPDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8669; Mature: 8669
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTEKPARDRFCARRNLFLACNIEVAFRGFQSIMVLPVPSGSLKGMESREKKFHEPFRRK CCCCCCHHHHHHHHCCEEEEECHHHEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH RTSHSSYPGRHPDF HCCCCCCCCCCCCC >Mature Secondary Structure MQTEKPARDRFCARRNLFLACNIEVAFRGFQSIMVLPVPSGSLKGMESREKKFHEPFRRK CCCCCCHHHHHHHHCCEEEEECHHHEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH RTSHSSYPGRHPDF HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA