| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858301
Identifier: 85858301
GI number: 85858301
Start: 472547
End: 472870
Strand: Direct
Name: 85858301
Synonym: SYN_02610
Alternate gene names: NA
Gene position: 472547-472870 (Clockwise)
Preceding gene: 85858296
Following gene: 85858302
Centisome position: 14.86
GC content: 57.41
Gene sequence:
>324_bases GTGTCAACCGCAAAAATTTTTTGCCGGTTGAGCCCTTTCCATACGAAGGCGGGCACCCGCCGTACAGGATTCGACAGGGG CTCCCCCTCGTACCCTCGTACGGGTTGCAGACGGGTTGGCATTCAGCCCCCGGCGGGGAAATTCAGGGGCTTCCCTCGCG CGGGTTGCAGACGGGACGCAAATCAGATTGAAAAACTGGTGACCTCGGCTCCTTCTCGCTCAGGTTGCAGACGGAGAAAC CTGCCCGTGACCGTTTTTGCGCCAGGAGGAATTTATTCCTCGCCTGCAACATTGAGGTTGCGTTCAGAGGATTCCAGAGC ATAA
Upstream 100 bases:
>100_bases AAGCAGGAAGAGTACACAAAGAGGTGACTCGGAAGTTAACAGAAAACCGGCAGCAAAGGAAAGAATGTAATGGAGGAGTT TCTAATAAATTGCCTGGAGA
Downstream 100 bases:
>100_bases TGGTGCTGCCTGTTCCATCAGGAAGCTTGAAAGGAATGGAATCGCGGGAGAAAAAATTTCATGAACCCTTCAGAAGAAAA CGAACAAGCCATTCTTCATA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSTAKIFCRLSPFHTKAGTRRTGFDRGSPSYPRTGCRRVGIQPPAGKFRGFPRAGCRRDANQIEKLVTSAPSRSGCRRRN LPVTVFAPGGIYSSPATLRLRSEDSRA
Sequences:
>Translated_107_residues MSTAKIFCRLSPFHTKAGTRRTGFDRGSPSYPRTGCRRVGIQPPAGKFRGFPRAGCRRDANQIEKLVTSAPSRSGCRRRN LPVTVFAPGGIYSSPATLRLRSEDSRA >Mature_106_residues STAKIFCRLSPFHTKAGTRRTGFDRGSPSYPRTGCRRVGIQPPAGKFRGFPRAGCRRDANQIEKLVTSAPSRSGCRRRNL PVTVFAPGGIYSSPATLRLRSEDSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11741; Mature: 11609
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAKIFCRLSPFHTKAGTRRTGFDRGSPSYPRTGCRRVGIQPPAGKFRGFPRAGCRRDA CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCH NQIEKLVTSAPSRSGCRRRNLPVTVFAPGGIYSSPATLRLRSEDSRA HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCC >Mature Secondary Structure STAKIFCRLSPFHTKAGTRRTGFDRGSPSYPRTGCRRVGIQPPAGKFRGFPRAGCRRDA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCH NQIEKLVTSAPSRSGCRRRNLPVTVFAPGGIYSSPATLRLRSEDSRA HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA