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The map label for this gene is 85858271

Identifier: 85858271

GI number: 85858271

Start: 431143

End: 432453

Strand: Direct

Name: 85858271

Synonym: SYN_01102

Alternate gene names: NA

Gene position: 431143-432453 (Clockwise)

Preceding gene: 85858270

Following gene: 85858272

Centisome position: 13.56

GC content: 48.44

Gene sequence:

>1311_bases
TTGGAAAAGAGCACCGATCTATCATCTGATTCTTTGCCGGAACGCCGGGTAGCGCGCAAAGCTGTTCAGACGGTCGCCTG
GGTCATCTGGATCGCCCACTTTGCTTTCATTGCCCGTCAGAAGATCTTTGTCAGGGGACGTCTGGATTTTGATACGGTCG
ATACCTATGCCGCAGTCGATGTGCTCGTTGTGTTTTTCCTGGCGCTTGTCCTTCTTTTCAGCCGCAAGATTTCTCAATTC
CTTTCAATCGCTTTCAAGTCATCGCTTTTCTGGCTGCTGGCTTACTACATGGTCTGTGCCCTGAGCGCTATCTGGTCGTT
ACGCCCCCTCTATTCACTCTATCGTTCCGTCGAATGTGTAATATTTATATCATCCCTGTTTGTTGCGCTGTCATACTGCT
CCTCATTCGAAAAAGCAGAGCGGAAAGTGCTGTTCCTTTCTCTTCTATCGGTTTTCGTGCAGATGGGGATTCATATGAGA
AGCGGACTCGTCTTTTCACTTGGGGCATGGCACACAAATGCCTATTCCGCATCAGCAGCCGTGCTTTTTGCCTACTGTGC
CGGCGAATATCTGGCCCTGGGAAAAAAGAAACTGCTGGAAACAGGGGAGCGGCTTCGACGAAAGATGTTGTTCCGTTACG
GTCTGTTGTCTTTTCTGCTTCTAATTCTTGGCACCAGCTCGGCAAGCAACGTGGCGGTACTGTTTGGGATTATCGTCATC
CTCTTCGCGCAGCGGCGAATTGGGCTGATGATGTTTATCATGTATGCTTCAATCCTTCTCTTTTTTCTTGGTGGAGGGAT
GGAACCACTGAAGGATTTTTTATTTCCCGGGAAAACGAATCAAGGGATAGAAACGCTTGGCGGTCGGACGATTGCTTGGA
CTTATTATGCTGAAAGAATAGCGAATAGTCCGATCTGGGGGTATGGGCTTGGGGTCGTACCCTCCGGTAAAGGGACGGTA
TTTGAGGCTTATTCAAAAGGTGGAGTGGGGGCTGCATATTCTCATAATTTTGTACTTTCAATCTTGATCGGGACGGGGGT
TCTGGGACTTTTTGTTTTTATTATCTTCCCGTTAAAGCTGGTGCGAGAAATGATGCGGTCTCTGAGAAGAAAGATCCAAG
GTGCGACAGGAGTGCTGGGGGCGATGGCGGCAGGTTTTGTAAACAGCCTTGCTATGCCGATGATCGCCGACCGGTGGGTT
ACGGCAAGTTTTGCCTTTTTCTCGATACTGGCATTGTTTATCCTTCACGTATATCCTCACAGTTCTCGATCTTCCAAACA
ATCTTTGGCTGAATTCTCAAAACAGACCTAA

Upstream 100 bases:

>100_bases
AGCCGGCACATCTCAAGATAATAAGGACACTTCAAGGTCATCATTTTTTTAGGATTCGGAGTAAATCATCAATAATATCT
CCATAACTGATACTCGACTT

Downstream 100 bases:

>100_bases
ATTATTATGCATCTCAACAAAAACTCTCACTTTGAACCACCGACTGGGTAAACACTCTTGCATATTGCGTATATCGGCAG
ATCTTTTCTGGATTATAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MEKSTDLSSDSLPERRVARKAVQTVAWVIWIAHFAFIARQKIFVRGRLDFDTVDTYAAVDVLVVFFLALVLLFSRKISQF
LSIAFKSSLFWLLAYYMVCALSAIWSLRPLYSLYRSVECVIFISSLFVALSYCSSFEKAERKVLFLSLLSVFVQMGIHMR
SGLVFSLGAWHTNAYSASAAVLFAYCAGEYLALGKKKLLETGERLRRKMLFRYGLLSFLLLILGTSSASNVAVLFGIIVI
LFAQRRIGLMMFIMYASILLFFLGGGMEPLKDFLFPGKTNQGIETLGGRTIAWTYYAERIANSPIWGYGLGVVPSGKGTV
FEAYSKGGVGAAYSHNFVLSILIGTGVLGLFVFIIFPLKLVREMMRSLRRKIQGATGVLGAMAAGFVNSLAMPMIADRWV
TASFAFFSILALFILHVYPHSSRSSKQSLAEFSKQT

Sequences:

>Translated_436_residues
MEKSTDLSSDSLPERRVARKAVQTVAWVIWIAHFAFIARQKIFVRGRLDFDTVDTYAAVDVLVVFFLALVLLFSRKISQF
LSIAFKSSLFWLLAYYMVCALSAIWSLRPLYSLYRSVECVIFISSLFVALSYCSSFEKAERKVLFLSLLSVFVQMGIHMR
SGLVFSLGAWHTNAYSASAAVLFAYCAGEYLALGKKKLLETGERLRRKMLFRYGLLSFLLLILGTSSASNVAVLFGIIVI
LFAQRRIGLMMFIMYASILLFFLGGGMEPLKDFLFPGKTNQGIETLGGRTIAWTYYAERIANSPIWGYGLGVVPSGKGTV
FEAYSKGGVGAAYSHNFVLSILIGTGVLGLFVFIIFPLKLVREMMRSLRRKIQGATGVLGAMAAGFVNSLAMPMIADRWV
TASFAFFSILALFILHVYPHSSRSSKQSLAEFSKQT
>Mature_436_residues
MEKSTDLSSDSLPERRVARKAVQTVAWVIWIAHFAFIARQKIFVRGRLDFDTVDTYAAVDVLVVFFLALVLLFSRKISQF
LSIAFKSSLFWLLAYYMVCALSAIWSLRPLYSLYRSVECVIFISSLFVALSYCSSFEKAERKVLFLSLLSVFVQMGIHMR
SGLVFSLGAWHTNAYSASAAVLFAYCAGEYLALGKKKLLETGERLRRKMLFRYGLLSFLLLILGTSSASNVAVLFGIIVI
LFAQRRIGLMMFIMYASILLFFLGGGMEPLKDFLFPGKTNQGIETLGGRTIAWTYYAERIANSPIWGYGLGVVPSGKGTV
FEAYSKGGVGAAYSHNFVLSILIGTGVLGLFVFIIFPLKLVREMMRSLRRKIQGATGVLGAMAAGFVNSLAMPMIADRWV
TASFAFFSILALFILHVYPHSSRSSKQSLAEFSKQT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48509; Mature: 48509

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHCCC
>Mature Secondary Structure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CCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA