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The map label for this gene is yibD [C]

Identifier: 85858270

GI number: 85858270

Start: 430062

End: 431063

Strand: Direct

Name: yibD [C]

Synonym: SYN_01103

Alternate gene names: 85858270

Gene position: 430062-431063 (Clockwise)

Preceding gene: 85858269

Following gene: 85858271

Centisome position: 13.53

GC content: 47.7

Gene sequence:

>1002_bases
ATGGATCTCGTTTCAATTATAATTCCAGCTTACAACGCTGAAGCAACTCTTAAGCGTTGTTTAGACAGTGTATTTTTTCA
GACATATCGTGAACATCAAGTTATCGTCATCAACGATGGCTCAACTGATAACACCAGGGGCATTGCCTCTGAATACAAGG
ATGCCATTGAGTACATTGAACAGGATAATCAAGGGCCAGGGCGGTCAAGAAATGTCGGGTTAGGTCGTGCGAAAGGCAGC
TTCATTGCTTTTTTGGATGCTGACGACTACTGGTTGCCAGCATTTTTGTCTAAGTGTTTAATTTTTATGAAAGAAAACCA
CGATGCTGCTGCGGTTACAACGGGGCAGTATATCAAACTGTGGGGTCATTCTGATATCATTCGTCCCCCAATTCTTAACG
AGCCCAGCTGCCGAAAAGTCCCTTTTATTATTGATAATTTTTTTTCTTTTTGGGCTGCCCAGAATCACGTGGTCACTGGT
GCAAGTCTAATAAGACGAAATGTCATTGAAAGAGCTGGCTATCAAAGGACCGATTTCCGTGTGTGTGAAGATCTTGAGTA
CTGGGGATATCTGGCAACGTTTGGCAAATGGGGATTCATACCCGAAGTCCTGTGGATCGGGGACCCGACACCGGCAGTGG
CATCCCAGGGGTGGTTGAAAAAGCACTTGCGGCGGTGGGCGAACCTGCCGACCCTCGACCAGTGGGAGAAGCGGATCCTG
CCGAGGCTCAGCACGGAAGACTTGCCTGGCTTCCACAGGGTAAAGGGCCGGGTGGCTGCAAGCCTCGTTCATCAGAATAT
CCTTGCCGGAAATGACAGGGAAGCGAAGCGCATTCTAAACCAATTGGGTAATAATGTTCCGGAGAGCCGCATTATGAAAT
TATTACAGACCGGCATCAAGGGGGGAGCTGTGGGATGGTATCTTGTTTGTCAAATGATCCGGTTGCGCGAAAGACTGAAA
TCAAATGCAGTCGCTATTTCCAGCCGGCACATCTCAAGATAA

Upstream 100 bases:

>100_bases
GTACTTAGTATTATCAAGAACCGGCGTGAAGTCTTACTTGTGGCCAGGAAGCCTTGCGTACAGAGCTGTCATTATTAGCA
CCATCAATTAGAGAAGTTTT

Downstream 100 bases:

>100_bases
TAAGGACACTTCAAGGTCATCATTTTTTTAGGATTCGGAGTAAATCATCAATAATATCTCCATAACTGATACTCGACTTT
TGGAAAAGAGCACCGATCTA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDLVSIIIPAYNAEATLKRCLDSVFFQTYREHQVIVINDGSTDNTRGIASEYKDAIEYIEQDNQGPGRSRNVGLGRAKGS
FIAFLDADDYWLPAFLSKCLIFMKENHDAAAVTTGQYIKLWGHSDIIRPPILNEPSCRKVPFIIDNFFSFWAAQNHVVTG
ASLIRRNVIERAGYQRTDFRVCEDLEYWGYLATFGKWGFIPEVLWIGDPTPAVASQGWLKKHLRRWANLPTLDQWEKRIL
PRLSTEDLPGFHRVKGRVAASLVHQNILAGNDREAKRILNQLGNNVPESRIMKLLQTGIKGGAVGWYLVCQMIRLRERLK
SNAVAISSRHISR

Sequences:

>Translated_333_residues
MDLVSIIIPAYNAEATLKRCLDSVFFQTYREHQVIVINDGSTDNTRGIASEYKDAIEYIEQDNQGPGRSRNVGLGRAKGS
FIAFLDADDYWLPAFLSKCLIFMKENHDAAAVTTGQYIKLWGHSDIIRPPILNEPSCRKVPFIIDNFFSFWAAQNHVVTG
ASLIRRNVIERAGYQRTDFRVCEDLEYWGYLATFGKWGFIPEVLWIGDPTPAVASQGWLKKHLRRWANLPTLDQWEKRIL
PRLSTEDLPGFHRVKGRVAASLVHQNILAGNDREAKRILNQLGNNVPESRIMKLLQTGIKGGAVGWYLVCQMIRLRERLK
SNAVAISSRHISR
>Mature_333_residues
MDLVSIIIPAYNAEATLKRCLDSVFFQTYREHQVIVINDGSTDNTRGIASEYKDAIEYIEQDNQGPGRSRNVGLGRAKGS
FIAFLDADDYWLPAFLSKCLIFMKENHDAAAVTTGQYIKLWGHSDIIRPPILNEPSCRKVPFIIDNFFSFWAAQNHVVTG
ASLIRRNVIERAGYQRTDFRVCEDLEYWGYLATFGKWGFIPEVLWIGDPTPAVASQGWLKKHLRRWANLPTLDQWEKRIL
PRLSTEDLPGFHRVKGRVAASLVHQNILAGNDREAKRILNQLGNNVPESRIMKLLQTGIKGGAVGWYLVCQMIRLRERLK
SNAVAISSRHISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=106, Percent_Identity=36.7924528301887, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37884; Mature: 37884

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVSIIIPAYNAEATLKRCLDSVFFQTYREHQVIVINDGSTDNTRGIASEYKDAIEYIE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
QDNQGPGRSRNVGLGRAKGSFIAFLDADDYWLPAFLSKCLIFMKENHDAAAVTTGQYIKL
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEE
WGHSDIIRPPILNEPSCRKVPFIIDNFFSFWAAQNHVVTGASLIRRNVIERAGYQRTDFR
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCHHH
VCEDLEYWGYLATFGKWGFIPEVLWIGDPTPAVASQGWLKKHLRRWANLPTLDQWEKRIL
HHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHC
PRLSTEDLPGFHRVKGRVAASLVHQNILAGNDREAKRILNQLGNNVPESRIMKLLQTGIK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
GGAVGWYLVCQMIRLRERLKSNAVAISSRHISR
CCCHHHHHHHHHHHHHHHHHHCCEEECHHCCCC
>Mature Secondary Structure
MDLVSIIIPAYNAEATLKRCLDSVFFQTYREHQVIVINDGSTDNTRGIASEYKDAIEYIE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
QDNQGPGRSRNVGLGRAKGSFIAFLDADDYWLPAFLSKCLIFMKENHDAAAVTTGQYIKL
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEE
WGHSDIIRPPILNEPSCRKVPFIIDNFFSFWAAQNHVVTGASLIRRNVIERAGYQRTDFR
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCHHH
VCEDLEYWGYLATFGKWGFIPEVLWIGDPTPAVASQGWLKKHLRRWANLPTLDQWEKRIL
HHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHC
PRLSTEDLPGFHRVKGRVAASLVHQNILAGNDREAKRILNQLGNNVPESRIMKLLQTGIK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
GGAVGWYLVCQMIRLRERLKSNAVAISSRHISR
CCCHHHHHHHHHHHHHHHHHHCCEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]