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The map label for this gene is yfbE [C]

Identifier: 85858244

GI number: 85858244

Start: 399186

End: 400418

Strand: Direct

Name: yfbE [C]

Synonym: SYN_01128

Alternate gene names: 85858244

Gene position: 399186-400418 (Clockwise)

Preceding gene: 85858243

Following gene: 85858245

Centisome position: 12.56

GC content: 61.07

Gene sequence:

>1233_bases
ATGATTACGAGAGGGCGTCGCGCGACTTTGAAAGCATGCGCGAACAGTTCCTTCCTGGCATGGAATGCAGAGGGTGACAT
CATGGACTGGCGCATAACGCTTTCCGACATCGACATGGGAAATGAAGAAATCGAGGCGGTGGATCGCGTCCTCCGCAGCA
AATGGCTCACCATGGGATCGGTAACGCAGGAATTCGAGAAAGCGGTCGCCGACTACGTGGAGGCAAAGCATGCCGTCGCG
GTCACCAACGCCACGGCTGCCCTGCATCTTGCCTGCGTGGCGGCGGGGCTGGGGCCGGGGAAAGAGGCGATTGTCCCTTC
GCTGACGTTCGTCGCCACGGCAAACGCGGTCCGTTACACGGGCGCCTCCGTTGTCTTCGCGGATATCGCCGGGGAACAGG
ACCTGAACATTTCGGTCGAGGCGATCGAGCGGTCCGTGACGGAAAGGACCCGCGCCATTGTGGTCGTCCATTACGGCGGG
TATGCCTGCGCCATGCCCGCGATTCTGGAGTTGGCTCGGCGGCACAACCTGGCTGTGATCGAAGACGCGGCTCACGCGAT
CGGCTCCGAACTGCAGGGGAAAAAGCTGGGCGCCTGGGGAGACGTGGGATGCTTCAGCTTTTTTTCCAACAAGAACATGA
CCACGGCGGAAGGGGGAATGCTGGTGACCAGTGACGACGCCCTCGCCGAAAGGCTCCGCCTGCTCCGGTCCCACGGAATG
ACCACCCTGACGCTGGACCGCCACAAAGGGCACGCGTGGAGCTACGATGTGGTTGATCTGGGATACAATTACCGCATCGA
TGAAATCCGCTCGGCGATGGGCCTTGTGCAGCTCGGCAGACTGGACAGGAACAATCGCCGCCGCCGGGAATTTACGCGGC
TCTATCGCGAGTTGCTGCGGAATGAAGCGCCGCAGGTCACTCTGCCGTTTTCCAGTCACCCGGGAGTATCGGCCGCGCAT
CTCATGCCGATCCTGCTGCCGCCGGGTGCGGACCGTCTCCGCTTCATGGAGCACATGAAGTCTCGGGGCATCCAGACCAG
CATCCATTACCCGCCGATCCACCGGTTCAGCGCCTATCGGGAAGAGGGTGATGCGCAGAGGATAAAACTGCCGATTACGG
AAGAGGTCGCCGCGAGAATTGTCACACTGCCGTTGTATCCCACGATGACGGACGAAAACGTGCTGGAAGTGGTTAGCTGT
GCCGCTGGAGGGATCCTGCCGAAGGGATGCTGA

Upstream 100 bases:

>100_bases
TACCTCGATTTTCCCGATCTGGTGAAAAAGCTGATCGCCGCCGGCGAAAAAGTGGTCGGCTACCGGTTCCACGGCTACTG
GGAAGATCTGGGGCGGCCGG

Downstream 100 bases:

>100_bases
AATGAAAGCAACAAGATATTTCCTCGCCGTGCTGGCCGCCCTGTTCGCTTTTTCCGGATTTTTCGCGCCGGCAGTTCTGG
CCGCCGAGACCGTAACTGCC

Product: nucleotide-sugar aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MITRGRRATLKACANSSFLAWNAEGDIMDWRITLSDIDMGNEEIEAVDRVLRSKWLTMGSVTQEFEKAVADYVEAKHAVA
VTNATAALHLACVAAGLGPGKEAIVPSLTFVATANAVRYTGASVVFADIAGEQDLNISVEAIERSVTERTRAIVVVHYGG
YACAMPAILELARRHNLAVIEDAAHAIGSELQGKKLGAWGDVGCFSFFSNKNMTTAEGGMLVTSDDALAERLRLLRSHGM
TTLTLDRHKGHAWSYDVVDLGYNYRIDEIRSAMGLVQLGRLDRNNRRRREFTRLYRELLRNEAPQVTLPFSSHPGVSAAH
LMPILLPPGADRLRFMEHMKSRGIQTSIHYPPIHRFSAYREEGDAQRIKLPITEEVAARIVTLPLYPTMTDENVLEVVSC
AAGGILPKGC

Sequences:

>Translated_410_residues
MITRGRRATLKACANSSFLAWNAEGDIMDWRITLSDIDMGNEEIEAVDRVLRSKWLTMGSVTQEFEKAVADYVEAKHAVA
VTNATAALHLACVAAGLGPGKEAIVPSLTFVATANAVRYTGASVVFADIAGEQDLNISVEAIERSVTERTRAIVVVHYGG
YACAMPAILELARRHNLAVIEDAAHAIGSELQGKKLGAWGDVGCFSFFSNKNMTTAEGGMLVTSDDALAERLRLLRSHGM
TTLTLDRHKGHAWSYDVVDLGYNYRIDEIRSAMGLVQLGRLDRNNRRRREFTRLYRELLRNEAPQVTLPFSSHPGVSAAH
LMPILLPPGADRLRFMEHMKSRGIQTSIHYPPIHRFSAYREEGDAQRIKLPITEEVAARIVTLPLYPTMTDENVLEVVSC
AAGGILPKGC
>Mature_410_residues
MITRGRRATLKACANSSFLAWNAEGDIMDWRITLSDIDMGNEEIEAVDRVLRSKWLTMGSVTQEFEKAVADYVEAKHAVA
VTNATAALHLACVAAGLGPGKEAIVPSLTFVATANAVRYTGASVVFADIAGEQDLNISVEAIERSVTERTRAIVVVHYGG
YACAMPAILELARRHNLAVIEDAAHAIGSELQGKKLGAWGDVGCFSFFSNKNMTTAEGGMLVTSDDALAERLRLLRSHGM
TTLTLDRHKGHAWSYDVVDLGYNYRIDEIRSAMGLVQLGRLDRNNRRRREFTRLYRELLRNEAPQVTLPFSSHPGVSAAH
LMPILLPPGADRLRFMEHMKSRGIQTSIHYPPIHRFSAYREEGDAQRIKLPITEEVAARIVTLPLYPTMTDENVLEVVSC
AAGGILPKGC

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=365, Percent_Identity=39.1780821917808, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI2367285, Length=344, Percent_Identity=33.4302325581395, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 45072; Mature: 45072

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRGRRATLKACANSSFLAWNAEGDIMDWRITLSDIDMGNEEIEAVDRVLRSKWLTMGS
CCCCCCCHHHHHHCCCCEEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
VTQEFEKAVADYVEAKHAVAVTNATAALHLACVAAGLGPGKEAIVPSLTFVATANAVRYT
HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCHHEEC
GASVVFADIAGEQDLNISVEAIERSVTERTRAIVVVHYGGYACAMPAILELARRHNLAVI
CCEEEEEECCCCCCCCEEHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHCCCEEE
EDAAHAIGSELQGKKLGAWGDVGCFSFFSNKNMTTAEGGMLVTSDDALAERLRLLRSHGM
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCEEEECCHHHHHHHHHHHHCCC
TTLTLDRHKGHAWSYDVVDLGYNYRIDEIRSAMGLVQLGRLDRNNRRRREFTRLYRELLR
EEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NEAPQVTLPFSSHPGVSAAHLMPILLPPGADRLRFMEHMKSRGIQTSIHYPPIHRFSAYR
CCCCEEEECCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHH
EEGDAQRIKLPITEEVAARIVTLPLYPTMTDENVLEVVSCAAGGILPKGC
CCCCCCEEECCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MITRGRRATLKACANSSFLAWNAEGDIMDWRITLSDIDMGNEEIEAVDRVLRSKWLTMGS
CCCCCCCHHHHHHCCCCEEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
VTQEFEKAVADYVEAKHAVAVTNATAALHLACVAAGLGPGKEAIVPSLTFVATANAVRYT
HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCHHEEC
GASVVFADIAGEQDLNISVEAIERSVTERTRAIVVVHYGGYACAMPAILELARRHNLAVI
CCEEEEEECCCCCCCCEEHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHCCCEEE
EDAAHAIGSELQGKKLGAWGDVGCFSFFSNKNMTTAEGGMLVTSDDALAERLRLLRSHGM
HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCEEEECCHHHHHHHHHHHHCCC
TTLTLDRHKGHAWSYDVVDLGYNYRIDEIRSAMGLVQLGRLDRNNRRRREFTRLYRELLR
EEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NEAPQVTLPFSSHPGVSAAHLMPILLPPGADRLRFMEHMKSRGIQTSIHYPPIHRFSAYR
CCCCEEEECCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHH
EEGDAQRIKLPITEEVAARIVTLPLYPTMTDENVLEVVSCAAGGILPKGC
CCCCCCEEECCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]