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The map label for this gene is 85858239

Identifier: 85858239

GI number: 85858239

Start: 394032

End: 395249

Strand: Direct

Name: 85858239

Synonym: SYN_01133

Alternate gene names: NA

Gene position: 394032-395249 (Clockwise)

Preceding gene: 85858238

Following gene: 85858241

Centisome position: 12.39

GC content: 52.46

Gene sequence:

>1218_bases
ATGAGTCAGTTAGAAATTTCACCAGTAGAGTCTACGTCGGAGTCTGCATCGGAATATTCCTCGTTCTATGTCTGGACGAT
ATCCGGGGCAGCCTTCGTTTATGTCATCGTTGCCTTCGGCCTGAGCGCCATCCCGAGTCTGTCGCGCCTGGCGCTTTATG
CATCCGTGATGCTTCTGGCGATGCTGATTCTCAGCATGGGAAAACTCAAACTGTCGCTCTGGATGCTCGTGTTGACGCTG
TTTTACCTTTATCTCGCCCTGCCCGCATTGGCTTTGAGCAATGTGCCCATCTACAGACTCAGCACTCTTACCACGGTATT
TCTGGGGACGCTATCGATCGGCATTGCTCTGCAAAACAGAATGCTATCCTACAAAGCGTTAACCTATGGAGCGATCGCCG
CCGCGATTATCAATGTTGTGGCTATCTTCGCCGGAGTGGAAACATCCAGTCATGATGTTGAAGCCATAGGACGTTACTCG
GGACTGATGGGAAACGCCAACGCCCTTGCCATCAGTATGGCCCTGGCTGCATTTCTGATATGGCTCTACCCCGAGCGCTT
CAGTCGACAGGTCCGGGCGCTGGGAATATTCCTGGTGCTGTACGGAATGTATATCACGGGGTCGATCAAAGGCGTCCTGA
TGGCGATGGCATTGTTCGCCCTGGTTTTCATGAACCACCTGGTGAAGCTCAGCATGGTCAGAATCCTGGCCTATCTCTCC
GCGGCCGCCGCGGCTGTCCTGGCGCTTTACGGGGGCCTTACGGCAATTGCCGCGAAATACAGCACACAGATCGTCGCGAT
TGACCGGATTCTGACCGCTTTTGCCGGAGAGAATGCCTCCATCAACGCGCGACTGTCCATGATCGATTTCGGCCTGAACC
TGTGGGAGAAAGCGCCTGTATTCGGATATGGACTCAATCAGTTTGCGACTCTCAGTAAAACCGGTTCCTATGCCCATAAC
AATTATATTGAACTTGCCGTATCCGGCGGCATTATCGCGTTGATCTTCTTTTACGCCCTGTACGTCATAATCGCGTGCAA
CGCGCTGAAACAGTCCAAGGATTTTTGCATCCGCCTCCTGTTGCTCGTGGCGACTCTTTTCATGATCGATACCGCAGCCG
TTTCCTTTTTAGACAAAGGGATCATGTGCATGGTGGGCGTTCTGCTCGCTGTTTCCTCCGAAGAAAAGGCAGAGGAAAGC
GATAGATATCAAACGTGA

Upstream 100 bases:

>100_bases
TCTGATGTTATCTTTCTTTGGAGGCCTGACGCCGGAGCAGCGGGAGAGCATTTCCCGTCGGGTTCACAGGGCAATTACTT
AGGAGTTCAGGAGTCGGATC

Downstream 100 bases:

>100_bases
TAAAATGTCCGTATAAACGGTCACTTGCTATGGTTACCCTCCTGTCTCATCCCTACAAGTAAGGTTTTTGGAAGTTTAAA
ATCAGACTCTCCCCGATAGC

Product: o-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSQLEISPVESTSESASEYSSFYVWTISGAAFVYVIVAFGLSAIPSLSRLALYASVMLLAMLILSMGKLKLSLWMLVLTL
FYLYLALPALALSNVPIYRLSTLTTVFLGTLSIGIALQNRMLSYKALTYGAIAAAIINVVAIFAGVETSSHDVEAIGRYS
GLMGNANALAISMALAAFLIWLYPERFSRQVRALGIFLVLYGMYITGSIKGVLMAMALFALVFMNHLVKLSMVRILAYLS
AAAAAVLALYGGLTAIAAKYSTQIVAIDRILTAFAGENASINARLSMIDFGLNLWEKAPVFGYGLNQFATLSKTGSYAHN
NYIELAVSGGIIALIFFYALYVIIACNALKQSKDFCIRLLLLVATLFMIDTAAVSFLDKGIMCMVGVLLAVSSEEKAEES
DRYQT

Sequences:

>Translated_405_residues
MSQLEISPVESTSESASEYSSFYVWTISGAAFVYVIVAFGLSAIPSLSRLALYASVMLLAMLILSMGKLKLSLWMLVLTL
FYLYLALPALALSNVPIYRLSTLTTVFLGTLSIGIALQNRMLSYKALTYGAIAAAIINVVAIFAGVETSSHDVEAIGRYS
GLMGNANALAISMALAAFLIWLYPERFSRQVRALGIFLVLYGMYITGSIKGVLMAMALFALVFMNHLVKLSMVRILAYLS
AAAAAVLALYGGLTAIAAKYSTQIVAIDRILTAFAGENASINARLSMIDFGLNLWEKAPVFGYGLNQFATLSKTGSYAHN
NYIELAVSGGIIALIFFYALYVIIACNALKQSKDFCIRLLLLVATLFMIDTAAVSFLDKGIMCMVGVLLAVSSEEKAEES
DRYQT
>Mature_404_residues
SQLEISPVESTSESASEYSSFYVWTISGAAFVYVIVAFGLSAIPSLSRLALYASVMLLAMLILSMGKLKLSLWMLVLTLF
YLYLALPALALSNVPIYRLSTLTTVFLGTLSIGIALQNRMLSYKALTYGAIAAAIINVVAIFAGVETSSHDVEAIGRYSG
LMGNANALAISMALAAFLIWLYPERFSRQVRALGIFLVLYGMYITGSIKGVLMAMALFALVFMNHLVKLSMVRILAYLSA
AAAAVLALYGGLTAIAAKYSTQIVAIDRILTAFAGENASINARLSMIDFGLNLWEKAPVFGYGLNQFATLSKTGSYAHNN
YIELAVSGGIIALIFFYALYVIIACNALKQSKDFCIRLLLLVATLFMIDTAAVSFLDKGIMCMVGVLLAVSSEEKAEESD
RYQT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43766; Mature: 43634

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLEISPVESTSESASEYSSFYVWTISGAAFVYVIVAFGLSAIPSLSRLALYASVMLLA
CCCCCCCCCCCCHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MLILSMGKLKLSLWMLVLTLFYLYLALPALALSNVPIYRLSTLTTVFLGTLSIGIALQNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MLSYKALTYGAIAAAIINVVAIFAGVETSSHDVEAIGRYSGLMGNANALAISMALAAFLI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
WLYPERFSRQVRALGIFLVLYGMYITGSIKGVLMAMALFALVFMNHLVKLSMVRILAYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAAAVLALYGGLTAIAAKYSTQIVAIDRILTAFAGENASINARLSMIDFGLNLWEKAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCHHHHCCCC
FGYGLNQFATLSKTGSYAHNNYIELAVSGGIIALIFFYALYVIIACNALKQSKDFCIRLL
CCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVATLFMIDTAAVSFLDKGIMCMVGVLLAVSSEEKAEESDRYQT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure 
SQLEISPVESTSESASEYSSFYVWTISGAAFVYVIVAFGLSAIPSLSRLALYASVMLLA
CCCCCCCCCCCHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MLILSMGKLKLSLWMLVLTLFYLYLALPALALSNVPIYRLSTLTTVFLGTLSIGIALQNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MLSYKALTYGAIAAAIINVVAIFAGVETSSHDVEAIGRYSGLMGNANALAISMALAAFLI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
WLYPERFSRQVRALGIFLVLYGMYITGSIKGVLMAMALFALVFMNHLVKLSMVRILAYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAAAVLALYGGLTAIAAKYSTQIVAIDRILTAFAGENASINARLSMIDFGLNLWEKAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCHHHHCCCC
FGYGLNQFATLSKTGSYAHNNYIELAVSGGIIALIFFYALYVIIACNALKQSKDFCIRLL
CCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVATLFMIDTAAVSFLDKGIMCMVGVLLAVSSEEKAEESDRYQT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA