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The map label for this gene is 85858238

Identifier: 85858238

GI number: 85858238

Start: 392430

End: 394013

Strand: Direct

Name: 85858238

Synonym: SYN_01134

Alternate gene names: NA

Gene position: 392430-394013 (Clockwise)

Preceding gene: 85858237

Following gene: 85858239

Centisome position: 12.34

GC content: 55.87

Gene sequence:

>1584_bases
ATGATGCCTATTTCGAGTCTTAACCGCCCATTGGAATTTGTCTCCGGCCTGCTGGCGGACACTACCCTGACCAAGAAGGC
CTATCTCAATACCCTGGCGTCCATGCTGGAGTATGCTACGTCTTTGCTTGTCGGTTTTTTTCTGACGCCGTACATGGTGA
AAGGGCTCGGAGATTATTCGTTCGGACTGTGGCAGGTTTTGAGTCGTCTGATCGGCTACCTCTCGCCGGCGAGCGGCCGC
CCGACTCACGCGTTGAAATGGACGCTGGCCAATCAGCAGGCTTCATCGGACTATGAGCAGAAACGACGCTATGTCGGCAG
TGCGTTGGCCGTATGGGCGATTTTCCTCCCGGTCGTGCTCGGACTGGGTTGCATCGTTGCCTGGTTTGTCCCCGTCTGGA
TCAAGGCGCCCGCCGAATTTGTCTGGACCGTGCGCGTTGTCGCTTTCGTGCTTGTGTCAAACATCCTGCTGGACGCGCTT
TCATCGATACCCCAGGGGGTTCTGCAGGGTGAAAATCTGGGCTACAAGCGCATGGGGATCACGGCCGGTCTGGTTCTGTT
CGGGGGAGGGGTGACATGGTTTGCCATTTATCTCAAAACCGGCATTGTCGGCGTGAGTTTTTCCGTTCTGCTGAAAACGG
TTCTGGCGGGCATCGTCCTGTTTCTGATTGTCAGCCGTTACGTGAAATGGTTTGGATTCGCCAAGCCCCTGAAAACGGAT
ATGCACGTCATGCTGGGACGCAGCGGCTGGTTTCTCGGCTGGAATCTCGTAACGACTCTGCTGATCGCCAGTGATGTCGT
GGTTCTGGGGCTGTGCAGCTCGATTGTGGCGGTGACGAACTATTCCCTCACCAAATACGTTCCTGAGATGATGATCAGCA
TTATCGCCAACATCATCTTCGCCATCATGCCGGGGCTGGGCGGCATTATCGGCGCCGGCGACCTGAAAAGAGCCGTCCGC
CTGCGCAGCGAGATTCTGTCCTTTGTCTGGCTTGTTGTAACGGTTATCGGCGCAAGCGTCCTGCTGTTGAACCGGTCTTT
TCTCGAACTATGGGTGGGAACGGGCCGGTTTTCCGGCGCCCTGCCTCATCTGCTGATCGTCGTCGGGGTTATGCAGCTGA
TTTTCATCCGAAGCGACGCCAACATCATCGACCTGACTCTTAACCTCAGCCAAAAAGTCCTGCTGGGTTTATTGTCTGTA
GCCATTTCGATTTCCGCCGCCAGCGTGATGGTAGGATACTTTCATATGGGAGTTGTCGGCTTGTGCCTCGGAATCATGAG
TGGCCGCCTGATTTTAACAGCGGGCTATCCCCTGCTCATCAGCCGCTTTCTGGATATTCCGCTGTCCGCGCAGATGAAAG
GCGTGGTCAGACCCATGCTGGTCACGATCCTGCTGTTCGGCAGCGCGCTTTTTCTCGATAACCTGCTGCAGACGATGCGC
TGGCCGGGTTTGCACAGCTGGATCGGCTTTTTCCTTTCCGCGGCATTTGCCGGTGCGGTCGTTCTGATGTTATCTTTCTT
TGGAGGCCTGACGCCGGAGCAGCGGGAGAGCATTTCCCGTCGGGTTCACAGGGCAATTACTTAG

Upstream 100 bases:

>100_bases
GTGAGTTGAACGTGGTTGAGTTCGATACCTCCCAGCTGTCCCTGGGCGACACGATAGAAAAAATCCGGACACTGTTTCTA
AATTCCATCAAAAAGCAGAG

Downstream 100 bases:

>100_bases
GAGTTCAGGAGTCGGATCATGAGTCAGTTAGAAATTTCACCAGTAGAGTCTACGTCGGAGTCTGCATCGGAATATTCCTC
GTTCTATGTCTGGACGATAT

Product: oligosaccharide translocase

Products: NA

Alternate protein names: Flippase

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MMPISSLNRPLEFVSGLLADTTLTKKAYLNTLASMLEYATSLLVGFFLTPYMVKGLGDYSFGLWQVLSRLIGYLSPASGR
PTHALKWTLANQQASSDYEQKRRYVGSALAVWAIFLPVVLGLGCIVAWFVPVWIKAPAEFVWTVRVVAFVLVSNILLDAL
SSIPQGVLQGENLGYKRMGITAGLVLFGGGVTWFAIYLKTGIVGVSFSVLLKTVLAGIVLFLIVSRYVKWFGFAKPLKTD
MHVMLGRSGWFLGWNLVTTLLIASDVVVLGLCSSIVAVTNYSLTKYVPEMMISIIANIIFAIMPGLGGIIGAGDLKRAVR
LRSEILSFVWLVVTVIGASVLLLNRSFLELWVGTGRFSGALPHLLIVVGVMQLIFIRSDANIIDLTLNLSQKVLLGLLSV
AISISAASVMVGYFHMGVVGLCLGIMSGRLILTAGYPLLISRFLDIPLSAQMKGVVRPMLVTILLFGSALFLDNLLQTMR
WPGLHSWIGFFLSAAFAGAVVLMLSFFGGLTPEQRESISRRVHRAIT

Sequences:

>Translated_527_residues
MMPISSLNRPLEFVSGLLADTTLTKKAYLNTLASMLEYATSLLVGFFLTPYMVKGLGDYSFGLWQVLSRLIGYLSPASGR
PTHALKWTLANQQASSDYEQKRRYVGSALAVWAIFLPVVLGLGCIVAWFVPVWIKAPAEFVWTVRVVAFVLVSNILLDAL
SSIPQGVLQGENLGYKRMGITAGLVLFGGGVTWFAIYLKTGIVGVSFSVLLKTVLAGIVLFLIVSRYVKWFGFAKPLKTD
MHVMLGRSGWFLGWNLVTTLLIASDVVVLGLCSSIVAVTNYSLTKYVPEMMISIIANIIFAIMPGLGGIIGAGDLKRAVR
LRSEILSFVWLVVTVIGASVLLLNRSFLELWVGTGRFSGALPHLLIVVGVMQLIFIRSDANIIDLTLNLSQKVLLGLLSV
AISISAASVMVGYFHMGVVGLCLGIMSGRLILTAGYPLLISRFLDIPLSAQMKGVVRPMLVTILLFGSALFLDNLLQTMR
WPGLHSWIGFFLSAAFAGAVVLMLSFFGGLTPEQRESISRRVHRAIT
>Mature_527_residues
MMPISSLNRPLEFVSGLLADTTLTKKAYLNTLASMLEYATSLLVGFFLTPYMVKGLGDYSFGLWQVLSRLIGYLSPASGR
PTHALKWTLANQQASSDYEQKRRYVGSALAVWAIFLPVVLGLGCIVAWFVPVWIKAPAEFVWTVRVVAFVLVSNILLDAL
SSIPQGVLQGENLGYKRMGITAGLVLFGGGVTWFAIYLKTGIVGVSFSVLLKTVLAGIVLFLIVSRYVKWFGFAKPLKTD
MHVMLGRSGWFLGWNLVTTLLIASDVVVLGLCSSIVAVTNYSLTKYVPEMMISIIANIIFAIMPGLGGIIGAGDLKRAVR
LRSEILSFVWLVVTVIGASVLLLNRSFLELWVGTGRFSGALPHLLIVVGVMQLIFIRSDANIIDLTLNLSQKVLLGLLSV
AISISAASVMVGYFHMGVVGLCLGIMSGRLILTAGYPLLISRFLDIPLSAQMKGVVRPMLVTILLFGSALFLDNLLQTMR
WPGLHSWIGFFLSAAFAGAVVLMLSFFGGLTPEQRESISRRVHRAIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57351; Mature: 57351

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS00027 HOMEOBOX_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA