Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
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Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is 85374994
Identifier: 85374994
GI number: 85374994
Start: 2195264
End: 2196124
Strand: Direct
Name: 85374994
Synonym: ELI_10835
Alternate gene names: NA
Gene position: 2195264-2196124 (Clockwise)
Preceding gene: 85374993
Following gene: 85374995
Centisome position: 71.92
GC content: 60.98
Gene sequence:
>861_bases ATGTCGGCGGCTCTTCACGCGCAGGATAATCTCGGCAATCTCGAGGCACTGATTTTCGAGGCATCGCACTCGGAGGTCAC CATGACCGACGATGGGGTCGCACGCATCGGTTGGACGCGCGCCGACGTGCCGGTGATGGTCGACGGCATGCGCCTCGATC CCCCGGCAGGTCTCGGCTCATGGGCTGCCTTCAAACCCGTCGATGGCGGAGTGATGGTCATGGGCGACACGGTCGTATTC GAGGATGAGATAACAGCCGCGATGGACGCTGCCCTCGCCAACGGGTTGACCGTCACCGCGCTGCACAATCACTTCATATT CGACGATCCGCCGGTCTATTTTATGCATATCGGCGGGCATGGGGAAACCGCCAAGATGGCAGCGGGTGTAAAAGCCGTTT GGGATGCCATCAAGGAAGTGCGCGCCGCCTCGCCGACGCCGCAGCGCAGTTTCGGTGGCATGACGCCGGATGCAAACGGC ACGATCGAAGCCCTGGCGCTGAGCGAAATCTTGGGCACCGAGCCAAGCATCGCCGATGGTGTCGTGAAATACACCTTCGC TCGCCAAGGCCGCATGCACGGCGTTGAGATCGGTGGTTCGATGGGGCTTACGACCTGGGCGGCGTTCTCGGGCACCAACG ACCTTGCCGCCGTGGATGGTGACTTCATCATGACCGAGGACGAAGTCCAGCCCGTGCTCCGCGCACTGCGCGAGCGGGAT ATCCATATCGTAGCATTGCATAACCACATGATCGGCGGTGAACCGATGTTTTACTTCCTCCACTACTGGGGAATGGGTCC AGCAAAAGAGCTTGCAGCGGCGATTGCTGCTGCCCGTAACGCACAGGCCGAAACCGGATAG
Upstream 100 bases:
>100_bases CAATGATGGCTGGCACCTGAAATCACATCCAAGGAGAACTAAGATGAAGCAATTACGCAGAACATTGTTCGTCGGCGGCT TGGCTCTATCGCTATCAGCG
Downstream 100 bases:
>100_bases GCGCAACCATTCCGATAAAAATCAGTACGGCAGCGATCGCTTGCACCTCATTGCGACAGGCATTGTCTTCGAAATGGCAG GGAACGTGAGTTATGTCGCT
Product: lipoprotein lpqo
Products: NA
Alternate protein names: Lipoprotein Lpqo; LysM Domain-Containing Protein; LOW QUALITY PROTEIN Lipoprotein Lpqo; Lipoprotein LpqO; Lipoprotein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSAALHAQDNLGNLEALIFEASHSEVTMTDDGVARIGWTRADVPVMVDGMRLDPPAGLGSWAAFKPVDGGVMVMGDTVVF EDEITAAMDAALANGLTVTALHNHFIFDDPPVYFMHIGGHGETAKMAAGVKAVWDAIKEVRAASPTPQRSFGGMTPDANG TIEALALSEILGTEPSIADGVVKYTFARQGRMHGVEIGGSMGLTTWAAFSGTNDLAAVDGDFIMTEDEVQPVLRALRERD IHIVALHNHMIGGEPMFYFLHYWGMGPAKELAAAIAAARNAQAETG
Sequences:
>Translated_286_residues MSAALHAQDNLGNLEALIFEASHSEVTMTDDGVARIGWTRADVPVMVDGMRLDPPAGLGSWAAFKPVDGGVMVMGDTVVF EDEITAAMDAALANGLTVTALHNHFIFDDPPVYFMHIGGHGETAKMAAGVKAVWDAIKEVRAASPTPQRSFGGMTPDANG TIEALALSEILGTEPSIADGVVKYTFARQGRMHGVEIGGSMGLTTWAAFSGTNDLAAVDGDFIMTEDEVQPVLRALRERD IHIVALHNHMIGGEPMFYFLHYWGMGPAKELAAAIAAARNAQAETG >Mature_285_residues SAALHAQDNLGNLEALIFEASHSEVTMTDDGVARIGWTRADVPVMVDGMRLDPPAGLGSWAAFKPVDGGVMVMGDTVVFE DEITAAMDAALANGLTVTALHNHFIFDDPPVYFMHIGGHGETAKMAAGVKAVWDAIKEVRAASPTPQRSFGGMTPDANGT IEALALSEILGTEPSIADGVVKYTFARQGRMHGVEIGGSMGLTTWAAFSGTNDLAAVDGDFIMTEDEVQPVLRALRERDI HIVALHNHMIGGEPMFYFLHYWGMGPAKELAAAIAAARNAQAETG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30320; Mature: 30189
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAALHAQDNLGNLEALIFEASHSEVTMTDDGVARIGWTRADVPVMVDGMRLDPPAGLGS CCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEECCEECCCCEEEECEEECCCCCCCC WAAFKPVDGGVMVMGDTVVFEDEITAAMDAALANGLTVTALHNHFIFDDPPVYFMHIGGH CCEECCCCCCEEEEECEEEECCHHHHHHHHHHHCCEEEEEEECCEEECCCCEEEEEECCC GETAKMAAGVKAVWDAIKEVRAASPTPQRSFGGMTPDANGTIEALALSEILGTEPSIADG CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH VVKYTFARQGRMHGVEIGGSMGLTTWAAFSGTNDLAAVDGDFIMTEDEVQPVLRALRERD HHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEECCCEEEEHHHHHHHHHHHHHCC IHIVALHNHMIGGEPMFYFLHYWGMGPAKELAAAIAAARNAQAETG EEEEEEECCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAALHAQDNLGNLEALIFEASHSEVTMTDDGVARIGWTRADVPVMVDGMRLDPPAGLGS CCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEECCEECCCCEEEECEEECCCCCCCC WAAFKPVDGGVMVMGDTVVFEDEITAAMDAALANGLTVTALHNHFIFDDPPVYFMHIGGH CCEECCCCCCEEEEECEEEECCHHHHHHHHHHHCCEEEEEEECCEEECCCCEEEEEECCC GETAKMAAGVKAVWDAIKEVRAASPTPQRSFGGMTPDANGTIEALALSEILGTEPSIADG CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH VVKYTFARQGRMHGVEIGGSMGLTTWAAFSGTNDLAAVDGDFIMTEDEVQPVLRALRERD HHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEECCCEEEEHHHHHHHHHHHHHCC IHIVALHNHMIGGEPMFYFLHYWGMGPAKELAAAIAAARNAQAETG EEEEEEECCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA