| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is dut [H]
Identifier: 85374932
GI number: 85374932
Start: 2134258
End: 2134731
Strand: Reverse
Name: dut [H]
Synonym: ELI_10525
Alternate gene names: 85374932
Gene position: 2134731-2134258 (Counterclockwise)
Preceding gene: 85374933
Following gene: 85374926
Centisome position: 69.94
GC content: 66.88
Gene sequence:
>474_bases GTGGCCGCAGGCGGTAGCGCGCACGAAGTCCCCGTGCAGTTGAAACGCCTGCCGAACGGCCATGGCTTGCCGCTCCCCGA ATACGCCACCGATGGTGCGGCAGGAATGGACGTGGTCTCGGCCGAAGACATTACCCTCGCACCGGGTGCGCGCCATGCGG TCTCGACCGGCCTCGCGATGGCGATTCCGCCGGGCTTTGAAATCCAGGTCCGTCCGCGCTCGGGCCTTGCGCTCAAGCAC GGCATCACCGTGCCCAACACGCCGGGCACGATTGACAGCGATTATCGGGGCGAGCTGAAAGCAATCCTGATCAACCACGG CAGCGAACCCTTCGCCATCCATCGCGGCGACCGTATCGCGCAGCTGGTCATCGCGCCGGTTACGCGCGCGACATGGCAAG AAGTCGACGACCTCGATGCGACGGAGCGCGGGGCGGGCGGCTTCGGTTCTACCGGCGGACACGCCGAGCTCTAG
Upstream 100 bases:
>100_bases CTGCCGGAAATGCCCAAGGATCAGGTCGCCTATGCACTGGTCGAACGGATGGCCGAGGCGCTGGAGAAAGTGCACGAGGA TGACTGACACAAGCGCTCAA
Downstream 100 bases:
>100_bases CGCTTCAGCCGAAAATCCCGACTGCGAGTTCGGCCCAGACCAGCAGGAAAGCGAACACTGCGCCGGCCATCAAGAGGCTG CGAGCGCGGATGGTCTTGCC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAAGGSAHEVPVQLKRLPNGHGLPLPEYATDGAAGMDVVSAEDITLAPGARHAVSTGLAMAIPPGFEIQVRPRSGLALKH GITVPNTPGTIDSDYRGELKAILINHGSEPFAIHRGDRIAQLVIAPVTRATWQEVDDLDATERGAGGFGSTGGHAEL
Sequences:
>Translated_157_residues MAAGGSAHEVPVQLKRLPNGHGLPLPEYATDGAAGMDVVSAEDITLAPGARHAVSTGLAMAIPPGFEIQVRPRSGLALKH GITVPNTPGTIDSDYRGELKAILINHGSEPFAIHRGDRIAQLVIAPVTRATWQEVDDLDATERGAGGFGSTGGHAEL >Mature_156_residues AAGGSAHEVPVQLKRLPNGHGLPLPEYATDGAAGMDVVSAEDITLAPGARHAVSTGLAMAIPPGFEIQVRPRSGLALKHG ITVPNTPGTIDSDYRGELKAILINHGSEPFAIHRGDRIAQLVIAPVTRATWQEVDDLDATERGAGGFGSTGGHAEL
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=120, Percent_Identity=49.1666666666667, Blast_Score=110, Evalue=5e-25, Organism=Homo sapiens, GI4503423, Length=122, Percent_Identity=48.3606557377049, Blast_Score=110, Evalue=6e-25, Organism=Homo sapiens, GI70906441, Length=127, Percent_Identity=47.244094488189, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1790071, Length=136, Percent_Identity=47.0588235294118, Blast_Score=118, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71988561, Length=152, Percent_Identity=47.3684210526316, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319729, Length=129, Percent_Identity=43.4108527131783, Blast_Score=104, Evalue=7e-24, Organism=Drosophila melanogaster, GI24583610, Length=120, Percent_Identity=43.3333333333333, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI19921126, Length=120, Percent_Identity=43.3333333333333, Blast_Score=94, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16239; Mature: 16108
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGGSAHEVPVQLKRLPNGHGLPLPEYATDGAAGMDVVSAEDITLAPGARHAVSTGLAM CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCHHHHCCEEE AIPPGFEIQVRPRSGLALKHGITVPNTPGTIDSDYRGELKAILINHGSEPFAIHRGDRIA ECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEE QLVIAPVTRATWQEVDDLDATERGAGGFGSTGGHAEL EEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AAGGSAHEVPVQLKRLPNGHGLPLPEYATDGAAGMDVVSAEDITLAPGARHAVSTGLAM CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCHHHHCCEEE AIPPGFEIQVRPRSGLALKHGITVPNTPGTIDSDYRGELKAILINHGSEPFAIHRGDRIA ECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEE QLVIAPVTRATWQEVDDLDATERGAGGFGSTGGHAEL EEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA