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The map label for this gene is rlpA [C]

Identifier: 85374398

GI number: 85374398

Start: 1626522

End: 1627058

Strand: Direct

Name: rlpA [C]

Synonym: ELI_07855

Alternate gene names: 85374398

Gene position: 1626522-1627058 (Clockwise)

Preceding gene: 85374397

Following gene: 85374403

Centisome position: 53.29

GC content: 65.92

Gene sequence:

>537_bases
ATGTTCGGACGGGGTTCCAAGACGATCTGGCGCGGCTTTTCGGCCGCCGCATTCGCCCTGACGCTGGCCCTGCCCGCGCA
GGCGTCGACGCCCGCGGTGTTGTCCGACGGGATCTCGGACGCCGAGTTCGAACGCAGCTTCGAGCGTTTCGACGACCTTC
CCGATTTGCCGGAAGCGACTGGCAACGTCGTCGATATCGCCGCGTTCGATCCGCCTGTCGAGGTCGAGGAGGAGCCTGCC
GCTCGCTCCCTCGGCATGGGCGTCGCCTCCTATTATGGGCGCAAGTTTCACGGTCGCCGGACCGCCAATGGCGAGCGGTT
CGACATGAACGGCATGACCGCCGCTCACAAGACCCTGCCGTTCGGGACGAAGGTCCGGGTCACCAATGCGAGCAACGGTC
GCTCGGTTGTCGTCCGGATCAACGATCGCGGGCCTTTCGTCCGCGGGCGTACCATCGACCTGTCGCGCAAGGCCGCCGGT
GATCTCGGCATCATCAGCCGCGGTCACGGCCGGGTCGAGATCGAGATCCTCGACTAA

Upstream 100 bases:

>100_bases
TCCCGATTTCGCCTCGCCCCGGGGTGAAGCGAGCGATCCGAGCGCCCAAAAGTGGAACCCTGTCTGGTTTCTTAACTCGG
AGACCTTTATTTCGCCACCC

Downstream 100 bases:

>100_bases
ACCCCACGTGCTGCGGCCCTACCCGCGACCGGCAGGTGGCCTCCTTTCGCCCTACTCCTCCAGCTGCCCGCGGATCGCGC
CGCCGGGGAACTCCGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MFGRGSKTIWRGFSAAAFALTLALPAQASTPAVLSDGISDAEFERSFERFDDLPDLPEATGNVVDIAAFDPPVEVEEEPA
ARSLGMGVASYYGRKFHGRRTANGERFDMNGMTAAHKTLPFGTKVRVTNASNGRSVVVRINDRGPFVRGRTIDLSRKAAG
DLGIISRGHGRVEIEILD

Sequences:

>Translated_178_residues
MFGRGSKTIWRGFSAAAFALTLALPAQASTPAVLSDGISDAEFERSFERFDDLPDLPEATGNVVDIAAFDPPVEVEEEPA
ARSLGMGVASYYGRKFHGRRTANGERFDMNGMTAAHKTLPFGTKVRVTNASNGRSVVVRINDRGPFVRGRTIDLSRKAAG
DLGIISRGHGRVEIEILD
>Mature_178_residues
MFGRGSKTIWRGFSAAAFALTLALPAQASTPAVLSDGISDAEFERSFERFDDLPDLPEATGNVVDIAAFDPPVEVEEEPA
ARSLGMGVASYYGRKFHGRRTANGERFDMNGMTAAHKTLPFGTKVRVTNASNGRSVVVRINDRGPFVRGRTIDLSRKAAG
DLGIISRGHGRVEIEILD

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=91, Percent_Identity=45.0549450549451, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 19211; Mature: 19211

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRGSKTIWRGFSAAAFALTLALPAQASTPAVLSDGISDAEFERSFERFDDLPDLPEAT
CCCCCCCHHHHCCCHHHEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
GNVVDIAAFDPPVEVEEEPAARSLGMGVASYYGRKFHGRRTANGERFDMNGMTAAHKTLP
CCEEEEEECCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCC
FGTKVRVTNASNGRSVVVRINDRGPFVRGRTIDLSRKAAGDLGIISRGHGRVEIEILD
CCCEEEEEECCCCCEEEEEECCCCCEECCCEEECCCCCCCCEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MFGRGSKTIWRGFSAAAFALTLALPAQASTPAVLSDGISDAEFERSFERFDDLPDLPEAT
CCCCCCCHHHHCCCHHHEEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
GNVVDIAAFDPPVEVEEEPAARSLGMGVASYYGRKFHGRRTANGERFDMNGMTAAHKTLP
CCEEEEEECCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCC
FGTKVRVTNASNGRSVVVRINDRGPFVRGRTIDLSRKAAGDLGIISRGHGRVEIEILD
CCCEEEEEECCCCCEEEEEECCCCCEECCCEEECCCCCCCCEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]