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The map label for this gene is ybbI [C]

Identifier: 85374005

GI number: 85374005

Start: 1218254

End: 1218694

Strand: Direct

Name: ybbI [C]

Synonym: ELI_05890

Alternate gene names: 85374005

Gene position: 1218254-1218694 (Clockwise)

Preceding gene: 85374004

Following gene: 85374006

Centisome position: 39.91

GC content: 60.32

Gene sequence:

>441_bases
ATGGCAAACGTCGCATCGAAAGAATCGAGAGCGCATTCCGGCGCTCATCTCGAACGGCCGGACAAGCTGTCGCGCGAGCA
TTTCAGCATCTCCGATCTCACCAGCGAGTTCGAATGCACTGCACGCGCACTGCGGTTCTACGAGGACGAGGGCCTGATCA
ATCCCTCTCGCGTCGGCATGACCCGCGTCTATTCCAAGCGCGACCGGGCGCGGCTCGCCTGGATCATGCGCGCCAAGAAC
GTCGGTTTCAGCCTCGGCGAGATCAAGGAAATGATCGACCTCTACGACTTGGATGACGGCCGCGTGGAGCAGCGCCGCGT
CACGGTAGAAAAGTGCAGGACGCACATCGCCAAGCTCAAGCGCCAGCGTGCCGATATCGATTCCTCGATCAAGGAACTTA
CCGAATTCGTCGCCCAGATCGAGGCTCTCGACCTGGGCTGA

Upstream 100 bases:

>100_bases
ACACGGGGGCGCGGACATGCTTCTATCGCGAACTGGATTGCGGCGCTCTCCAAGACGTAAGAACTTGACCTTTACGTAAA
GGGCATGTACCGATCGACGC

Downstream 100 bases:

>100_bases
CACCGCTTCGAGCGGCCCCCGACTCACACTCCCATTGCCGAAGGACGCCCAATGCCGATCTACAACGCCCCGACCCGCGA
CACGCGCTTCGTCATCAACG

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; MerR Family Regulatory Family; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MANVASKESRAHSGAHLERPDKLSREHFSISDLTSEFECTARALRFYEDEGLINPSRVGMTRVYSKRDRARLAWIMRAKN
VGFSLGEIKEMIDLYDLDDGRVEQRRVTVEKCRTHIAKLKRQRADIDSSIKELTEFVAQIEALDLG

Sequences:

>Translated_146_residues
MANVASKESRAHSGAHLERPDKLSREHFSISDLTSEFECTARALRFYEDEGLINPSRVGMTRVYSKRDRARLAWIMRAKN
VGFSLGEIKEMIDLYDLDDGRVEQRRVTVEKCRTHIAKLKRQRADIDSSIKELTEFVAQIEALDLG
>Mature_145_residues
ANVASKESRAHSGAHLERPDKLSREHFSISDLTSEFECTARALRFYEDEGLINPSRVGMTRVYSKRDRARLAWIMRAKNV
GFSLGEIKEMIDLYDLDDGRVEQRRVTVEKCRTHIAKLKRQRADIDSSIKELTEFVAQIEALDLG

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16770; Mature: 16639

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVASKESRAHSGAHLERPDKLSREHFSISDLTSEFECTARALRFYEDEGLINPSRVGM
CCCCCCCHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TRVYSKRDRARLAWIMRAKNVGFSLGEIKEMIDLYDLDDGRVEQRRVTVEKCRTHIAKLK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RQRADIDSSIKELTEFVAQIEALDLG
HHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANVASKESRAHSGAHLERPDKLSREHFSISDLTSEFECTARALRFYEDEGLINPSRVGM
CCCCCCHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TRVYSKRDRARLAWIMRAKNVGFSLGEIKEMIDLYDLDDGRVEQRRVTVEKCRTHIAKLK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RQRADIDSSIKELTEFVAQIEALDLG
HHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA