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The map label for this gene is mmgC [H]

Identifier: 85374006

GI number: 85374006

Start: 1218746

End: 1220551

Strand: Direct

Name: mmgC [H]

Synonym: ELI_05895

Alternate gene names: 85374006

Gene position: 1218746-1220551 (Clockwise)

Preceding gene: 85374005

Following gene: 85374011

Centisome position: 39.93

GC content: 63.01

Gene sequence:

>1806_bases
ATGCCGATCTACAACGCCCCGACCCGCGACACGCGCTTCGTCATCAACGAGATGCTAGACTTGGCGAGCTACGGCAATTT
GCCCGGCTTCGAGAGTGCGACGCCGGACATGATCGACACCGTGGTCAACGAATACGGCAAGTTCGCCTCGGAAGTTCTCG
CCCCGATCAACCAGATCGGCGACCAGCAGGGCTGCACCCGACATAACGATGGTTCGGTCACAACGCCCGACGGCTTCAAG
GAAGCCTTCGACCAGTACCGCGAGAGCGGGTGGGGCACCATCTCGCAGCCCGAGGAGTTCGGCGGGCAGGGTATGCCGCA
CGTGCTCGGCTTCGTGATCGAGGAATTTACCGCCACCGCCAATCAGGCTTTCGGCATGTATCCGGGCTTGACGACCGGCG
CAATTTCAGCGCTGATTGCGAAAGGTTCGCCGGAGCAGCAGGAAATGTACCTGCCCAAAATGATTTCGGGCGAGTGGACC
GGCACCATGAACCTGACCGAGCCACATTGCGGAACCGATCTCGGCCTGATCCGCACCAAGGCAGAGCCGCAGGCCGACGG
GTCCTACGCCATCACCGGCACCAAGATCTTCATCTCGGCCGGCGAGCACGACATGGCGGACAACATCATCCACCTCGTGC
TGGCAAAGACGCCCGGCGCGCCCGACAGCACAAAGGGCATTTCGCTGTTCGTCGTACCGAAGTTCATCGTCGATGAAGAC
GGCAATCCGGGCGAGCGCAACGGCGTGACCTGCGGATCGATCGAGCACAAGATGGGCATCCACGGCAACGCGACCTGCGT
CATGAACTATGACGACGCCAAAGGCTGGATGGTCGGCGAAGAGAACAAGGGTCTTGCCGCCATGTTCATCATGATGAACG
CAGCGCGTCTGGGTGTCGGCATCCAGGGCCTCGGCCAGGCCGAAGTCGCGTACCAGAACGCTGTCGCCTATGCGCTCGAC
CGCCGTCAGGGCCGTGCGCTGACCGGCCCGGCCGAGCCGGAAGCCAAGGCCGACCCGATCTTCGTCCATCCGGACGTCCG
CCGCATGTTGATGGACGGCAAGGCTTTCACCGAGGGCATGCGTGCGCTGTGCCTGTGGGGCGCTCTCTTGGTGGACCTGA
CCCACAAGGCGCAGACCGAGGAAGAGCGCGCCGAAGCCGATGCGCTGATCGGCCTGATGACCCCGGTCATCAAGGGTTAT
GGCACCGACAAGGGCTATGCCATCGCCACCGACATGCAGCAGGTCTTCGGCGGCCACGGCTATATCGAGGAATGGGGCAT
GAGCCAGTATGTCCGCGATGCCCGTATCGCGCAGATCTACGAAGGCACCAACGGCATCCAGGCGATGGACCTGTGCGGCC
GCAAGCTCGCTCAGAATGGCGGCGCTGCGGTGCAGGCTTTTTTCAGAATGATCGGCGAGGAAATCGCTGAGGCCAAGGGC
AACGAAACCCTCGCTCCGATGGCCGAGAAGCTGGAGAAAGCGCTCAACGAACAGCAGGCCGCCACGATGTGGTTCATGCA
GAATGCCATGCAGAACCCGAACCATCTCGGTGCCGGCGCGCATCATTACATGCACATCATGGGGATCGTCACGCTCGGCC
TGATGTGGCTGCGCATGGCCAAGGTTGCGACCGAAGCGCTCGCCGGTTCGCCGGAGGATGCGTCGTTCTACGAGACCAAG
CTCGCGACCGCGCGCTACTACATGGATCGCTTCCTGCCCGACGCCGGCGCGCTGCGTCACAAGCTGGAGAGCGGCGCCGA
CAGCACCATGGCGCTGGGCGAAGAGGCCTTCGCCACCGCCGCCTGA

Upstream 100 bases:

>100_bases
GGAACTTACCGAATTCGTCGCCCAGATCGAGGCTCTCGACCTGGGCTGACACCGCTTCGAGCGGCCCCCGACTCACACTC
CCATTGCCGAAGGACGCCCA

Downstream 100 bases:

>100_bases
TCGCATTCAAGGATCGTCACGCAAGAGGGCTCGCAGCGATGCGGGCCCTCTTCATTTGCGGAGACCGCTCACTCCTCCGG
TAGAAAGTCCGGCACGCTCA

Product: putative acyl-CoA dehydrogenase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MPIYNAPTRDTRFVINEMLDLASYGNLPGFESATPDMIDTVVNEYGKFASEVLAPINQIGDQQGCTRHNDGSVTTPDGFK
EAFDQYRESGWGTISQPEEFGGQGMPHVLGFVIEEFTATANQAFGMYPGLTTGAISALIAKGSPEQQEMYLPKMISGEWT
GTMNLTEPHCGTDLGLIRTKAEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVVPKFIVDED
GNPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMMNAARLGVGIQGLGQAEVAYQNAVAYALD
RRQGRALTGPAEPEAKADPIFVHPDVRRMLMDGKAFTEGMRALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGY
GTDKGYAIATDMQQVFGGHGYIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRMIGEEIAEAKG
NETLAPMAEKLEKALNEQQAATMWFMQNAMQNPNHLGAGAHHYMHIMGIVTLGLMWLRMAKVATEALAGSPEDASFYETK
LATARYYMDRFLPDAGALRHKLESGADSTMALGEEAFATAA

Sequences:

>Translated_601_residues
MPIYNAPTRDTRFVINEMLDLASYGNLPGFESATPDMIDTVVNEYGKFASEVLAPINQIGDQQGCTRHNDGSVTTPDGFK
EAFDQYRESGWGTISQPEEFGGQGMPHVLGFVIEEFTATANQAFGMYPGLTTGAISALIAKGSPEQQEMYLPKMISGEWT
GTMNLTEPHCGTDLGLIRTKAEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVVPKFIVDED
GNPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMMNAARLGVGIQGLGQAEVAYQNAVAYALD
RRQGRALTGPAEPEAKADPIFVHPDVRRMLMDGKAFTEGMRALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGY
GTDKGYAIATDMQQVFGGHGYIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRMIGEEIAEAKG
NETLAPMAEKLEKALNEQQAATMWFMQNAMQNPNHLGAGAHHYMHIMGIVTLGLMWLRMAKVATEALAGSPEDASFYETK
LATARYYMDRFLPDAGALRHKLESGADSTMALGEEAFATAA
>Mature_600_residues
PIYNAPTRDTRFVINEMLDLASYGNLPGFESATPDMIDTVVNEYGKFASEVLAPINQIGDQQGCTRHNDGSVTTPDGFKE
AFDQYRESGWGTISQPEEFGGQGMPHVLGFVIEEFTATANQAFGMYPGLTTGAISALIAKGSPEQQEMYLPKMISGEWTG
TMNLTEPHCGTDLGLIRTKAEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVVPKFIVDEDG
NPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMMNAARLGVGIQGLGQAEVAYQNAVAYALDR
RQGRALTGPAEPEAKADPIFVHPDVRRMLMDGKAFTEGMRALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGYG
TDKGYAIATDMQQVFGGHGYIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRMIGEEIAEAKGN
ETLAPMAEKLEKALNEQQAATMWFMQNAMQNPNHLGAGAHHYMHIMGIVTLGLMWLRMAKVATEALAGSPEDASFYETKL
ATARYYMDRFLPDAGALRHKLESGADSTMALGEEAFATAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=409, Percent_Identity=26.161369193154, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI21361497, Length=428, Percent_Identity=26.8691588785047, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI226958414, Length=376, Percent_Identity=25.7978723404255, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI7656849, Length=373, Percent_Identity=29.2225201072386, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI4557233, Length=365, Percent_Identity=29.5890410958904, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4557235, Length=422, Percent_Identity=27.7251184834123, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI76496475, Length=422, Percent_Identity=27.7251184834123, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4501857, Length=385, Percent_Identity=26.2337662337662, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI4501859, Length=416, Percent_Identity=24.7596153846154, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4503943, Length=342, Percent_Identity=28.0701754385965, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI7669494, Length=334, Percent_Identity=27.2455089820359, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87082384, Length=322, Percent_Identity=27.9503105590062, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71985184, Length=554, Percent_Identity=25.4512635379061, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=412, Percent_Identity=28.1553398058252, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=374, Percent_Identity=26.4705882352941, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=404, Percent_Identity=27.2277227722772, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI86563383, Length=369, Percent_Identity=25.2032520325203, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=369, Percent_Identity=25.2032520325203, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17533517, Length=361, Percent_Identity=26.0387811634349, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=382, Percent_Identity=25.3926701570681, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=392, Percent_Identity=25.5102040816327, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=396, Percent_Identity=25, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=240, Percent_Identity=30.4166666666667, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=280, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=28.0172413793103, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=362, Percent_Identity=24.3093922651934, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21355753, Length=394, Percent_Identity=27.9187817258883, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21356377, Length=379, Percent_Identity=27.4406332453826, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI281363737, Length=418, Percent_Identity=25.3588516746411, Blast_Score=108, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666513, Length=368, Percent_Identity=26.0869565217391, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646207, Length=418, Percent_Identity=24.4019138755981, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24660351, Length=386, Percent_Identity=26.4248704663212, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19920834, Length=349, Percent_Identity=27.2206303724928, Blast_Score=86, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64965; Mature: 64834

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYNAPTRDTRFVINEMLDLASYGNLPGFESATPDMIDTVVNEYGKFASEVLAPINQIG
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DQQGCTRHNDGSVTTPDGFKEAFDQYRESGWGTISQPEEFGGQGMPHVLGFVIEEFTATA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
NQAFGMYPGLTTGAISALIAKGSPEQQEMYLPKMISGEWTGTMNLTEPHCGTDLGLIRTK
HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCEEECCCCCCCCCCCCEEEEC
AEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVVPKFIVDED
CCCCCCCCEEEEEEEEEEECCCCHHHHHHEEEEEECCCCCCCCCCCEEEEEEEEEEECCC
GNPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMMNAARLGVG
CCCCCCCCEECCCCHHCCCCCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHCCC
IQGLGQAEVAYQNAVAYALDRRQGRALTGPAEPEAKADPIFVHPDVRRMLMDGKAFTEGM
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCHHHHHHH
RALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGYGTDKGYAIATDMQQVFGGHG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCC
YIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRMIGEEIAEAKG
CHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
NETLAPMAEKLEKALNEQQAATMWFMQNAMQNPNHLGAGAHHYMHIMGIVTLGLMWLRMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVATEALAGSPEDASFYETKLATARYYMDRFLPDAGALRHKLESGADSTMALGEEAFATA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCHHHHHCC
A
C
>Mature Secondary Structure 
PIYNAPTRDTRFVINEMLDLASYGNLPGFESATPDMIDTVVNEYGKFASEVLAPINQIG
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DQQGCTRHNDGSVTTPDGFKEAFDQYRESGWGTISQPEEFGGQGMPHVLGFVIEEFTATA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
NQAFGMYPGLTTGAISALIAKGSPEQQEMYLPKMISGEWTGTMNLTEPHCGTDLGLIRTK
HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHCCCCCEEECCCCCCCCCCCCEEEEC
AEPQADGSYAITGTKIFISAGEHDMADNIIHLVLAKTPGAPDSTKGISLFVVPKFIVDED
CCCCCCCCEEEEEEEEEEECCCCHHHHHHEEEEEECCCCCCCCCCCEEEEEEEEEEECCC
GNPGERNGVTCGSIEHKMGIHGNATCVMNYDDAKGWMVGEENKGLAAMFIMMNAARLGVG
CCCCCCCCEECCCCHHCCCCCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHCCC
IQGLGQAEVAYQNAVAYALDRRQGRALTGPAEPEAKADPIFVHPDVRRMLMDGKAFTEGM
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCHHHHHHH
RALCLWGALLVDLTHKAQTEEERAEADALIGLMTPVIKGYGTDKGYAIATDMQQVFGGHG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCC
YIEEWGMSQYVRDARIAQIYEGTNGIQAMDLCGRKLAQNGGAAVQAFFRMIGEEIAEAKG
CHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
NETLAPMAEKLEKALNEQQAATMWFMQNAMQNPNHLGAGAHHYMHIMGIVTLGLMWLRMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVATEALAGSPEDASFYETKLATARYYMDRFLPDAGALRHKLESGADSTMALGEEAFATA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]