| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is map [H]
Identifier: 85373165
GI number: 85373165
Start: 383633
End: 384463
Strand: Direct
Name: map [H]
Synonym: ELI_01690
Alternate gene names: 85373165
Gene position: 383633-384463 (Clockwise)
Preceding gene: 85373164
Following gene: 85373168
Centisome position: 12.57
GC content: 62.21
Gene sequence:
>831_bases ATGAGCGAATATCAGGTCATCACCGCCGACGACGACGTCCAGCGCGACGGCACCATCAAATTGCACGGGCCCGAGGGGTT CGAAGGCATGCGCAAGGCCGGTCGCCTCGCTGCGGACATCCTCGATGCGACCGTCGAACTGGTCGAGCCGGGGGTCACTA CCGAAAGCATCGACGCCGCGATCCGCGGCATGATGCTTGATGCAGGTGCGGTTCCCGCAACGCTGGGGTATCGCGGCTAC ACGCACAGTTCGTGCATCTCGATCAATCATGTGATCTGCCACGGCATCCCGAGCGAGAAGACGCTCAAGGAAGGCGATAT CGTCAATATCGACGTCACCCCGCTGCTCGACGGCTGGCATGGCGATACCAGCCGCATGTTCTTCGCTGGCGAACCCCCGC TCAAGGCGAAGAAGCTGGTCGACGTGACCTATGAATGCCTGATGCTCGGCATCGAAGCGGCATCGAAGCCGGGCGCGCGG CTCGGCGATATCGGCGCGGCGATCGAAGCCCATGCCCGCCAATATCGCTACGGCGTAGTACGCGAATTTTGCGGCCACGG CCTCGGCCGTCTGTTTCATGACGCACCCGAAGTGGTGCATGCCGCGAAAGCGGGGACGGGGCCGGAGCTTAAGCCCGGCA TGTTCTTCACCATCGAACCGATGATCAATCTCGGCAAGCCGTGGGGCAAGGTGCTCAAGGACGGCTGGACCGCGGTGACC CGAGACAAGTCGCTAAGCGCGCAGTTCGAACATTCGCTCGGCATCACCGAGGACGGAATCGAGATTTTCACGGAAAGCAC CAAGGGGCTGCACCAGCCGCCCTATGCCTAA
Upstream 100 bases:
>100_bases GAGCCGGTGATGAAAGCGTTGAAGCCCGCCTATCGCGAGGCTTTCGCCCGGCGCTAGGTCCGTCTCGCATTTTGAGTGCG GCATCGCTATATCGCGCGTT
Downstream 100 bases:
>100_bases TTCTCCCGCGCAGCCCGGATGGCTGCGCCGGCGGCGAAGGGCGCGATGCCGCACAGTGCTAGGCTGATGGCACCAGCCAG CGCAATGCCGGTCGCATCGC
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSEYQVITADDDVQRDGTIKLHGPEGFEGMRKAGRLAADILDATVELVEPGVTTESIDAAIRGMMLDAGAVPATLGYRGY THSSCISINHVICHGIPSEKTLKEGDIVNIDVTPLLDGWHGDTSRMFFAGEPPLKAKKLVDVTYECLMLGIEAASKPGAR LGDIGAAIEAHARQYRYGVVREFCGHGLGRLFHDAPEVVHAAKAGTGPELKPGMFFTIEPMINLGKPWGKVLKDGWTAVT RDKSLSAQFEHSLGITEDGIEIFTESTKGLHQPPYA
Sequences:
>Translated_276_residues MSEYQVITADDDVQRDGTIKLHGPEGFEGMRKAGRLAADILDATVELVEPGVTTESIDAAIRGMMLDAGAVPATLGYRGY THSSCISINHVICHGIPSEKTLKEGDIVNIDVTPLLDGWHGDTSRMFFAGEPPLKAKKLVDVTYECLMLGIEAASKPGAR LGDIGAAIEAHARQYRYGVVREFCGHGLGRLFHDAPEVVHAAKAGTGPELKPGMFFTIEPMINLGKPWGKVLKDGWTAVT RDKSLSAQFEHSLGITEDGIEIFTESTKGLHQPPYA >Mature_275_residues SEYQVITADDDVQRDGTIKLHGPEGFEGMRKAGRLAADILDATVELVEPGVTTESIDAAIRGMMLDAGAVPATLGYRGYT HSSCISINHVICHGIPSEKTLKEGDIVNIDVTPLLDGWHGDTSRMFFAGEPPLKAKKLVDVTYECLMLGIEAASKPGARL GDIGAAIEAHARQYRYGVVREFCGHGLGRLFHDAPEVVHAAKAGTGPELKPGMFFTIEPMINLGKPWGKVLKDGWTAVTR DKSLSAQFEHSLGITEDGIEIFTESTKGLHQPPYA
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=247, Percent_Identity=48.582995951417, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI40385867, Length=248, Percent_Identity=41.1290322580645, Blast_Score=186, Evalue=1e-47, Organism=Escherichia coli, GI1786364, Length=248, Percent_Identity=50.4032258064516, Blast_Score=249, Evalue=2e-67, Organism=Caenorhabditis elegans, GI71996291, Length=248, Percent_Identity=43.5483870967742, Blast_Score=203, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6323273, Length=255, Percent_Identity=41.9607843137255, Blast_Score=213, Evalue=2e-56, Organism=Drosophila melanogaster, GI21355531, Length=263, Percent_Identity=42.5855513307985, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583427, Length=237, Percent_Identity=43.0379746835443, Blast_Score=192, Evalue=1e-49,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29768; Mature: 29637
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYQVITADDDVQRDGTIKLHGPEGFEGMRKAGRLAADILDATVELVEPGVTTESIDAA CCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IRGMMLDAGAVPATLGYRGYTHSSCISINHVICHGIPSEKTLKEGDIVNIDVTPLLDGWH HHHHHEECCCCCHHHCCCCCCCCCCEEECEEEEECCCCCCCCCCCCEEEEEECCCCCCCC GDTSRMFFAGEPPLKAKKLVDVTYECLMLGIEAASKPGARLGDIGAAIEAHARQYRYGVV CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH REFCGHGLGRLFHDAPEVVHAAKAGTGPELKPGMFFTIEPMINLGKPWGKVLKDGWTAVT HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHCCCCHHHHHHHCCCCEEE RDKSLSAQFEHSLGITEDGIEIFTESTKGLHQPPYA CCCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEYQVITADDDVQRDGTIKLHGPEGFEGMRKAGRLAADILDATVELVEPGVTTESIDAA CCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IRGMMLDAGAVPATLGYRGYTHSSCISINHVICHGIPSEKTLKEGDIVNIDVTPLLDGWH HHHHHEECCCCCHHHCCCCCCCCCCEEECEEEEECCCCCCCCCCCCEEEEEECCCCCCCC GDTSRMFFAGEPPLKAKKLVDVTYECLMLGIEAASKPGARLGDIGAAIEAHARQYRYGVV CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH REFCGHGLGRLFHDAPEVVHAAKAGTGPELKPGMFFTIEPMINLGKPWGKVLKDGWTAVT HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHCCCCHHHHHHHCCCCEEE RDKSLSAQFEHSLGITEDGIEIFTESTKGLHQPPYA CCCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]