Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is ctaE [H]
Identifier: 84625573
GI number: 84625573
Start: 4415768
End: 4416643
Strand: Reverse
Name: ctaE [H]
Synonym: XOO_3916
Alternate gene names: 84625573
Gene position: 4416643-4415768 (Counterclockwise)
Preceding gene: 84625574
Following gene: 84625571
Centisome position: 89.4
GC content: 60.39
Gene sequence:
>876_bases ATGGCCGACCACAGTCCCAATGCCAACGCGTATTTCGTCCCGAGCCAGAGCAAATGGCCCTTTGTCGGGTCGATTGCGAT GTTCGTGATGATGATCGGCGTGGCCAGCTGGCTCAACGATGCGGCATGGGGGCGGTGGACGTTCTTCACTGGCGTGGCAA TGCTGCTGGCGACCTTGTTCATGTGGTTTGGCGATGTCATTCGCGAATCCAACGCCGGGCATTACAACCGCCAGGTAGAT GGTTCGTTCCGCATGGGGATGGTGTGGTTCATCTTTTCCGAGGTGATGTTCTTCTGCGCCTTCTTCGGCGCGCTGTTCTA CACGCGCGTGCTGACGTTGCCCTGGCTGGGTGGCGAAGGCGATGGCGTGATGACCAACGAACTGTTGTGGAACGGTTATT CCGCTGCTTGGCCGACCAATGGCCCGGGCACGATTGGCGGGCAATTCCAGACCATTCCGGCCTGGGGCCTGCCGCTGATC AATACGCTGATCCTGCTCAGCTCAGGGGTGACCTTGACCATCGCCCACCATGCACTCAAGGGCGGCCGCCGCGGCGCGTT GCTGTTGTGGCTGGGCATGACCGTGCTGCTGGGCTGCGTGTTCCTGTTCCTGCAGGCAGAGGAATACATCCACGCCTACA CCGAGCTCAATCTCACCCTTGGCTCGGGCATCTACGGCTCGACCTTCTTCATGCTCACCGGCTTCCACGGCATGCATGTG CTGCTGGGCACCATCATGCTGGCAGTGATGTGGCTACGCGCCGCGAAGGGGCACTTCACTCGCGACAGCCACTTCGCTTT CGAAGCAGCCGCGTGGTACTGGCACTTCGTCGACGTGGTGTGGCTGGCGCTGTTCCTGTTCGTATATGTCCTTTGA
Upstream 100 bases:
>100_bases ACGCGCTGACCTCGGAACTGCAGGGCGCTGGTACGTCCGCCGCGCCGCGTGCCGCACCCTGATTCTTCATCCACACGCAT CACGACACGGAAGCAACGCC
Downstream 100 bases:
>100_bases GGGCGGCGATTGGGGATTCGGCATTGGGGATTCGTAAAAGCGGCAAGCTTTTAGCTTTTACGAATCCCCAATCCCCAATC CCCAATCCCATCGGCCACGT
Product: cytochrome C oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MADHSPNANAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFTGVAMLLATLFMWFGDVIRESNAGHYNRQVD GSFRMGMVWFIFSEVMFFCAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLI NTLILLSSGVTLTIAHHALKGGRRGALLLWLGMTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV LLGTIMLAVMWLRAAKGHFTRDSHFAFEAAAWYWHFVDVVWLALFLFVYVL
Sequences:
>Translated_291_residues MADHSPNANAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFTGVAMLLATLFMWFGDVIRESNAGHYNRQVD GSFRMGMVWFIFSEVMFFCAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLI NTLILLSSGVTLTIAHHALKGGRRGALLLWLGMTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV LLGTIMLAVMWLRAAKGHFTRDSHFAFEAAAWYWHFVDVVWLALFLFVYVL >Mature_290_residues ADHSPNANAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFTGVAMLLATLFMWFGDVIRESNAGHYNRQVDG SFRMGMVWFIFSEVMFFCAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLIN TLILLSSGVTLTIAHHALKGGRRGALLLWLGMTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHVL LGTIMLAVMWLRAAKGHFTRDSHFAFEAAAWYWHFVDVVWLALFLFVYVL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=284, Percent_Identity=38.7323943661972, Blast_Score=172, Evalue=4e-43, Organism=Escherichia coli, GI1786633, Length=170, Percent_Identity=30, Blast_Score=68, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6226542, Length=274, Percent_Identity=30.6569343065693, Blast_Score=111, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32569; Mature: 32438
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHSPNANAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFTGVAMLLATLF CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MWFGDVIRESNAGHYNRQVDGSFRMGMVWFIFSEVMFFCAFFGALFYTRVLTLPWLGGEG HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLINTLILLSSGVTLTIAHHALK CCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHC GGRRGALLLWLGMTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCHHHHH LLGTIMLAVMWLRAAKGHFTRDSHFAFEAAAWYWHFVDVVWLALFLFVYVL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure ADHSPNANAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFTGVAMLLATLF CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MWFGDVIRESNAGHYNRQVDGSFRMGMVWFIFSEVMFFCAFFGALFYTRVLTLPWLGGEG HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLINTLILLSSGVTLTIAHHALK CCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHC GGRRGALLLWLGMTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCHHHHH LLGTIMLAVMWLRAAKGHFTRDSHFAFEAAAWYWHFVDVVWLALFLFVYVL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]