Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84625571

Identifier: 84625571

GI number: 84625571

Start: 4414670

End: 4415389

Strand: Reverse

Name: 84625571

Synonym: XOO_3915

Alternate gene names: NA

Gene position: 4415389-4414670 (Counterclockwise)

Preceding gene: 84625573

Following gene: 84625570

Centisome position: 89.38

GC content: 65.56

Gene sequence:

>720_bases
ATGACGCGCAAGCACACGGCGGTGTTCGGCTGGTGTCTGGCGCTGCTGGTGAGCGCGGGTTTCGCGACGCTTGGGCACTG
GCAATTGCAGCGCATGCATAGCAAGCAGGCCTTGCTCGACCGCGCTGCCCATGTGCGCGATACCACGCTGTCTTTGGTGC
AAGCGCTGGCGACGCCGCACGATGTGGCATGGGTGCGTGGGTCAGTGCGTTTTTTGCCGCAACTGGTCTTGCTGGATAAT
CAGCTGCATGACGGGCGTGCCGGTGTGCGCGTGTATCAACTGGCGGCGCCTGATGGCGTGCCGGGAAGCGTCCTGGTCGA
TCTGGGCTGGTTGCCATTACCGGCTGATCGGAAGTTGCCCCGCATTGTTGCGCTAACTGGCATGCAGACCGTGCAGGGAC
TCTTGAGCGCACCGCCGTCGGCGGGGCTGGCGATCGGTCCTGCATTGGCAGCGGGGGTCGCTCCGCAGACGTGGTTGGCC
ACGCGTCTGGATAGGGAGGCTTTACGCAGCACGCTGGGCAGGCGCGACATTTCGTCGCAGGTGTTACGCCTGGACCCTGC
ATTGCCGGTTGGTTACGTACGCGATCTGGAAATGCTGCCAAACACGCTGCCCCCCGCGCGGCACTTGGGTTACGCGGTGC
AATGGTTCGGGCTGGCCGCCGCGGTCCTGGCGACCGCGATGCTGCTGACATGGCGTGCGCGCCGCCGCCGCGGGCACTGA

Upstream 100 bases:

>100_bases
GGAAGGCGACAATCAGCAGCGTCTTGAGCGAATCGTTCACAACAGCCCCGGGTGCAGTCGGCGTGGTGATGGCATTGCAC
GCCTTTTTGCGTCGCTTGTC

Downstream 100 bases:

>100_bases
CGCCTGCGGCATGAGAAAATCGCCGGCATGACCTCCTCCACATCGGCCACGCCGCAATCGGTCAAACGCGGCCGCAGGAT
ACTGATTGCCCTGGCGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPHDVAWVRGSVRFLPQLVLLDN
QLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLPRIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLA
TRLDREALRSTLGRRDISSQVLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH

Sequences:

>Translated_239_residues
MTRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPHDVAWVRGSVRFLPQLVLLDN
QLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLPRIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLA
TRLDREALRSTLGRRDISSQVLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH
>Mature_238_residues
TRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPHDVAWVRGSVRFLPQLVLLDNQ
LHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLPRIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLAT
RLDREALRSTLGRRDISSQVLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25969; Mature: 25838

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DVAWVRGSVRFLPQLVLLDNQLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
RIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLATRLDREALRSTLGRRDISSQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
VLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH
HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DVAWVRGSVRFLPQLVLLDNQLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
RIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLATRLDREALRSTLGRRDISSQ
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
VLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH
HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA