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The map label for this gene is 84625542

Identifier: 84625542

GI number: 84625542

Start: 4384162

End: 4384581

Strand: Reverse

Name: 84625542

Synonym: XOO_3885

Alternate gene names: NA

Gene position: 4384581-4384162 (Counterclockwise)

Preceding gene: 84625547

Following gene: 84625541

Centisome position: 88.75

GC content: 55.71

Gene sequence:

>420_bases
ATGGAGATCACGCCAGCACAATTTGCACTCATCGAGCATTGCCTACCTTTGCAACGCGGCAATGTCAGCATGACCAACCT
GCAGGTAGTCAACGCCCTTCTTTACGTCGCAGAGCATGGCTGCAAATGGCGCGGTCTGCCCGAGCGCTTTGGCAACTGGC
ATACGGTGTACACGCGCATTAACCGTCGGGCCAAGTCCGGTGTGCTGGACCGGATGTTCGCCCAATTGCAGACCTGCCAG
ATCGTGCGCATCAAAATCGAAGCGGTCTCGCTGGACTCCACCAGCATCAAGGTGCATCCGGATGGCACTGGCGCATTAAA
AAAAACGGCCCACAATCCATCGGGAAATCGCGCGGCGGATGGAACACCAAAATTCATATGGTTGCCGCAGATGCTCGAAC
AGCCATCACGTTCGGATTGA

Upstream 100 bases:

>100_bases
GAACGCTTTATTTCGTGTTGTTTTCGTTTTTCAAGGCGTGGTTTCCTGTAAGAGCTAGGGCCTGTTAACATTAATGTCTC
GAGCGATTAAACTATTGGGC

Downstream 100 bases:

>100_bases
CGCCTGGCAACGCACATGACGCACCCGCAGGCCGCGCGTTGCTTGAACACCTGGGGCCAGTGGAGCGGCCGGTTCATCTG
CTGATGGATCGCGCTTACGA

Product: ISXoo12 transposase

Products: NA

Alternate protein names: ISXoo12 Transposase; Insertion Element Transposase; Transposase And Inactivated Derivatives-Like Protein; ISHde2 Transposase OrfA; Transposase Fragment

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRRAKSGVLDRMFAQLQTCQ
IVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAADGTPKFIWLPQMLEQPSRSD

Sequences:

>Translated_139_residues
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRRAKSGVLDRMFAQLQTCQ
IVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAADGTPKFIWLPQMLEQPSRSD
>Mature_139_residues
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRRAKSGVLDRMFAQLQTCQ
IVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAADGTPKFIWLPQMLEQPSRSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15592; Mature: 15592

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRI
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHH
NRRAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAAD
HHHHHCCHHHHHHHHHHCCEEEEEEEEEEEECCCEEEECCCCCCCHHHCCCCCCCCCCCC
GTPKFIWLPQMLEQPSRSD
CCCCEEECHHHHCCCCCCC
>Mature Secondary Structure
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRI
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHH
NRRAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAAD
HHHHHCCHHHHHHHHHHCCEEEEEEEEEEEECCCEEEECCCCCCCHHHCCCCCCCCCCCC
GTPKFIWLPQMLEQPSRSD
CCCCEEECHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA