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The map label for this gene is 84625541

Identifier: 84625541

GI number: 84625541

Start: 4383818

End: 4384165

Strand: Reverse

Name: 84625541

Synonym: XOO_3884

Alternate gene names: NA

Gene position: 4384165-4383818 (Counterclockwise)

Preceding gene: 84625542

Following gene: 84625539

Centisome position: 88.74

GC content: 58.05

Gene sequence:

>348_bases
TTGACGCCTGGCAACGCACATGACGCACCCGCAGGCCGCGCGTTGCTTGAACACCTGGGGCCAGTGGAGCGGCCGGTTCA
TCTGCTGATGGATCGCGCTTACGAAGGCAATGAAACCCGCCAGTTGGCGCTCGATCTTGGCTTCGTGCCGGTGGTTCCAC
CCAAGTCCAATCGGGTCGATCCTTGGGAGTACGACAAGGAAATGTACAAGCGGCGCAACGAAGTGGAGAGGCTGTTCCGT
CGCTTGAAGGGCTACCGACGGATTTTCACGCGCTTCGAGAAGCTGGATGTCATGTTCCTTGGCTTCCTCAGCTTCGTTCT
GGTCGTTGATGGGCTTCGGATGTGTTAA

Upstream 100 bases:

>100_bases
TAAAAAAAACGGCCCACAATCCATCGGGAAATCGCGCGGCGGATGGAACACCAAAATTCATATGGTTGCCGCAGATGCTC
GAACAGCCATCACGTTCGGA

Downstream 100 bases:

>100_bases
CAGGCCCTAGTGAAGGGCGCTCGATCTGTGGCCTGGTTGCACGGCCCTTGCCCGCCCACCCTCGCAAGACACGCTGCACC
TACGTCCGTGCAAGCTCCCT

Product: ISXoo11 transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS4 Family; Transposase And Inactivated Derivatives-Like Protein; IS4 Insertion Sequence Transposase Protein; ISXoo11 Transposase; Transposase-Like Protein; IS5 Family Transposase

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTPGNAHDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFR
RLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC

Sequences:

>Translated_115_residues
MTPGNAHDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFR
RLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC
>Mature_114_residues
TPGNAHDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFRR
LKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13476; Mature: 13345

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGNAHDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVD
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPGNAHDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVD
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA