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The map label for this gene is rpe [H]

Identifier: 84625484

GI number: 84625484

Start: 4332205

End: 4332906

Strand: Reverse

Name: rpe [H]

Synonym: XOO_3827

Alternate gene names: 84625484

Gene position: 4332906-4332205 (Counterclockwise)

Preceding gene: 84625485

Following gene: 84625483

Centisome position: 87.71

GC content: 63.53

Gene sequence:

>702_bases
ATGGCGCTCCTGCATTTTTCCGAGCTGCCCATGCAACCGACGGCGATCGCCCCGTCCATTCTGTCTGCCGATTTCGCCCG
TCTGGGCGAGGAAGTGAACAACGTCCTCAAGGCCGGTGCCGACTGGGTGCACTTCGACGTGATGGACAACCACTATGTGC
CCAACCTCACCATCGGTTCGATGGTGTGCCAGGCGCTGCGCAAGCACGGCATCACCGCGCCGATCGACGTGCATCTGATG
GTCGAGCCGGTGGACCGCATCGTGCCGGATTTTGCCGACGCCGGTGCCACCACCATCAGCTTCCATCCCGAAGCCAGCCG
TCACGTGCACCGCACGATCCAGCTGATCAAGTCGCACGGCTGTCAGGCCGGGCTGGTGCTCAATCCGGCCACGCCGGTGG
ATATCCTGGATTGGGTGCTGCCCGAGCTGGATCTGGTACTGGTGATGTCGGTCAACCCGGGCTTCGGCGGCCAGGCCTTC
ATTCCTTCCGCGCTGGATAAATTGCGTGCGATCCGCACGAAGATCGATGCGCTGGGCAAGCCGATCCGGCTGGAGATCGA
TGGCGGCGTCAAGGCCGACAACATCGGTGCCATTGCCGCAGCCGGCGCCGACACCTTCGTTGCTGGCTCCGCAATCTTCA
ACGCGCCCGACTATGCGCAGGTGATTGCACAGATGCGTGCGGCGGTGGAGGCGGTGCGATGA

Upstream 100 bases:

>100_bases
GGTTGTACCGCACCCGGCGATGCCAGCCGCCCAACTGTCAGGCCGTTTCCCGCAGCGCCCGGTGGTGTTCGGCTTTCCTG
GCCGGGCCGCGGTTGCGACA

Downstream 100 bases:

>100_bases
GCCAGCCCGCGCCACAGATCCGCGGCGCCACCCCCGACGATGTGCCGCTGCTGCATGAACTCATCACCGCGCTGGCGCTA
TACGAGCGCGCGCCGGATGC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MALLHFSELPMQPTAIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKHGITAPIDVHLM
VEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGFGGQAF
IPSALDKLRAIRTKIDALGKPIRLEIDGGVKADNIGAIAAAGADTFVAGSAIFNAPDYAQVIAQMRAAVEAVR

Sequences:

>Translated_233_residues
MALLHFSELPMQPTAIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKHGITAPIDVHLM
VEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGFGGQAF
IPSALDKLRAIRTKIDALGKPIRLEIDGGVKADNIGAIAAAGADTFVAGSAIFNAPDYAQVIAQMRAAVEAVR
>Mature_232_residues
ALLHFSELPMQPTAIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKHGITAPIDVHLMV
EPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGFGGQAFI
PSALDKLRAIRTKIDALGKPIRLEIDGGVKADNIGAIAAAGADTFVAGSAIFNAPDYAQVIAQMRAAVEAVR

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=212, Percent_Identity=41.0377358490566, Blast_Score=156, Evalue=1e-38,
Organism=Homo sapiens, GI219879828, Length=212, Percent_Identity=39.622641509434, Blast_Score=147, Evalue=6e-36,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=34.5238095238095, Blast_Score=91, Evalue=9e-19,
Organism=Escherichia coli, GI1789788, Length=222, Percent_Identity=70.2702702702703, Blast_Score=327, Evalue=5e-91,
Organism=Escherichia coli, GI1790523, Length=201, Percent_Identity=37.3134328358209, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1790754, Length=208, Percent_Identity=32.2115384615385, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17552948, Length=220, Percent_Identity=42.7272727272727, Blast_Score=163, Evalue=7e-41,
Organism=Saccharomyces cerevisiae, GI6322341, Length=226, Percent_Identity=42.0353982300885, Blast_Score=177, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24586301, Length=223, Percent_Identity=38.5650224215247, Blast_Score=156, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24862; Mature: 24731

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLHFSELPMQPTAIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGS
CCEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHH
MVCQALRKHGITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHG
HHHHHHHHCCCCCCEEEEEEECCHHHHCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHCC
CQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGK
CCCCEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PIRLEIDGGVKADNIGAIAAAGADTFVAGSAIFNAPDYAQVIAQMRAAVEAVR
CEEEEECCCCCCCCCCEEEECCCCHHEECCHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALLHFSELPMQPTAIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGS
CEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHH
MVCQALRKHGITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHG
HHHHHHHHCCCCCCEEEEEEECCHHHHCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHCC
CQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGK
CCCCEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PIRLEIDGGVKADNIGAIAAAGADTFVAGSAIFNAPDYAQVIAQMRAAVEAVR
CEEEEECCCCCCCCCCEEEECCCCHHEECCHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]