Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is djlA [C]
Identifier: 84625485
GI number: 84625485
Start: 4333271
End: 4333600
Strand: Reverse
Name: djlA [C]
Synonym: XOO_3828
Alternate gene names: 84625485
Gene position: 4333600-4333271 (Counterclockwise)
Preceding gene: 84625487
Following gene: 84625484
Centisome position: 87.72
GC content: 66.06
Gene sequence:
>330_bases ATGTCCTGGTACGGAAAATTGCTCGGCGCACTGGCCGGCGCCTTGCTGCTTCGCGGGGCACCGGTGGTGGGGCTGATGAT CGGGCTGGCGATCGGCCACGCGGTCGACGCTGGCTGGTTCAAGCGGCGCCCGGAAAACCCATATGAAGCCTTGGGCCTGG AGCCGGACGCTACCACCGCCGAAATCGATCTGGCCTATCGCCGGCTGATGTCGCGTTACCACCCGGACAAGGTGGCCAAC GCCGACCCGGAAGCCCGCCGCCAGGCCGAAAAGAAAGCCAGCCAGATCAACGCCGCCTACGACCGGATTCAACGGCTGCG CAAGCGCTGA
Upstream 100 bases:
>100_bases ATTGGAGACCGTGCCGCGACGCCTGTGCGGGGCCCGTCAGCCAGCCCGGGCGGGCGTTCGGGTAAGATCGCCAACCCGCC TCCTGCCCCCGATCGCCCCC
Downstream 100 bases:
>100_bases GCGAAGGCCGCGCGCCCCAAGCCGGTGCCTGGGAAATGTCGCGCCTCTGCGCAGCGTGCTGGCTGCAGTCAGAACCGGTA TGGGACCAATAAAAACGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Heat Shock Chaperone Protein
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSWYGKLLGALAGALLLRGAPVVGLMIGLAIGHAVDAGWFKRRPENPYEALGLEPDATTAEIDLAYRRLMSRYHPDKVAN ADPEARRQAEKKASQINAAYDRIQRLRKR
Sequences:
>Translated_109_residues MSWYGKLLGALAGALLLRGAPVVGLMIGLAIGHAVDAGWFKRRPENPYEALGLEPDATTAEIDLAYRRLMSRYHPDKVAN ADPEARRQAEKKASQINAAYDRIQRLRKR >Mature_108_residues SWYGKLLGALAGALLLRGAPVVGLMIGLAIGHAVDAGWFKRRPENPYEALGLEPDATTAEIDLAYRRLMSRYHPDKVANA DPEARRQAEKKASQINAAYDRIQRLRKR
Specific function: Regulatory Dnak Co-Chaperone. Direct Interaction Between Dnak And Djla Is Needed For The Induction Of The Wcaabcde Operon, Involved In The Synthesis Of A Colanic Acid Polysaccharide Capsule, Possibly Through Activation Of The Rcsb/Rcsc Phosphotransfer Sig
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Type III Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12129; Mature: 11998
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWYGKLLGALAGALLLRGAPVVGLMIGLAIGHAVDAGWFKRRPENPYEALGLEPDATTA CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHH EIDLAYRRLMSRYHPDKVANADPEARRQAEKKASQINAAYDRIQRLRKR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWYGKLLGALAGALLLRGAPVVGLMIGLAIGHAVDAGWFKRRPENPYEALGLEPDATTA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHH EIDLAYRRLMSRYHPDKVANADPEARRQAEKKASQINAAYDRIQRLRKR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA