Click here to switch to the map view.

The map label for this gene is 84625411

Identifier: 84625411

GI number: 84625411

Start: 4245805

End: 4246536

Strand: Reverse

Name: 84625411

Synonym: XOO_3754

Alternate gene names: NA

Gene position: 4246536-4245805 (Counterclockwise)

Preceding gene: 84625412

Following gene: 84625410

Centisome position: 85.96

GC content: 62.98

Gene sequence:

>732_bases
ATGGGACGACCCGCTAAACCGTTGGTTGTCAGTGCCGATGATCGTTTGCAACTGGAGTCGATGGCCCGATCGCAAAGTTT
GCCGGCGGCCTTGTCGCGCCGCGCACAGATGATCCTGCGCATGGCCGACGGTGAACCGCAGACGACGATCGCGCATCGCT
ATGGCGTGAGCCGTCCGACGGTCACGTTGTGGCGTACCCGCTATCGCGAGCGCGGCATTGCCGGCCTGCATAACGAACTC
AAGCCCGGCCGGCCGCGCACGACCAGCGATGAGAAGGTGGCTGAACTGGTCAACACCGTCCTGACGCGCAAGCCGAAAGG
TCACACGCACTGGTCGCGCCGCACGCTGGCGGTCGAGACAGGACGTTCCACCACCACCGTCCACCGCTACATGACGCTGT
TCGGCCTGCAGCCGCATCGCTCCAAGCGCTTCAAGCTCTCCACCGATGCGTTCTTCATCGAGAAGGTGCGCGACATCGTC
GGCCTGTATCTGAATCCGCCGGATCATGCGTTGGTGCTGTGTGTGGACGAGAAGAGCCAGGTACAGGCCTTGGAGCGCAC
CCAGCCGGTGCTGCCGATGGGGTTGGGGTACGTCGAAGGAATCACGCACGACGACGTGCGCCATGGCACAACGCCCCTTT
TTGCCGCGCTGGACGTCGCCAACGGCAGCGTCATCACCCAGTGCAAACCCAGCACCGCCATCAGGAATTTCTCTCGTTCC
TGCGACATGTAG

Upstream 100 bases:

>100_bases
GAACGCTGCAGCTGGCATTGCCTAGTGTCGCGTTCCGCATGTAACTTTTCTTATCTGGCGTTGTCTAAAGAAGCACTCTT
GGATACCGGAGCGCTCGCTC

Downstream 100 bases:

>100_bases
ACGCGCAGGTGCCGCAGGATCTGGACGTGCATCTGATCTGCGACAACGACGCCACCCACAAGCAGGTCGAACGCTGGTTT
GGCCTGATCACCCAACGGGC

Product: ISXoo16 transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; ISMsm2 Transposase; Isrso5-Transposase Protein; ISMsm5 Transposase; Integrase Catalytic Subunit; LuxR Family Transcriptional Regulator; Aminoglycoside Phosphotransferase; LOW QUALITY PROTEIN ISMsm5 Transposase; ISPsy1 Transposase; Transposase Or Inactivated Derivative; Regulatory Protein LuxR; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MGRPAKPLVVSADDRLQLESMARSQSLPAALSRRAQMILRMADGEPQTTIAHRYGVSRPTVTLWRTRYRERGIAGLHNEL
KPGRPRTTSDEKVAELVNTVLTRKPKGHTHWSRRTLAVETGRSTTTVHRYMTLFGLQPHRSKRFKLSTDAFFIEKVRDIV
GLYLNPPDHALVLCVDEKSQVQALERTQPVLPMGLGYVEGITHDDVRHGTTPLFAALDVANGSVITQCKPSTAIRNFSRS
CDM

Sequences:

>Translated_243_residues
MGRPAKPLVVSADDRLQLESMARSQSLPAALSRRAQMILRMADGEPQTTIAHRYGVSRPTVTLWRTRYRERGIAGLHNEL
KPGRPRTTSDEKVAELVNTVLTRKPKGHTHWSRRTLAVETGRSTTTVHRYMTLFGLQPHRSKRFKLSTDAFFIEKVRDIV
GLYLNPPDHALVLCVDEKSQVQALERTQPVLPMGLGYVEGITHDDVRHGTTPLFAALDVANGSVITQCKPSTAIRNFSRS
CDM
>Mature_242_residues
GRPAKPLVVSADDRLQLESMARSQSLPAALSRRAQMILRMADGEPQTTIAHRYGVSRPTVTLWRTRYRERGIAGLHNELK
PGRPRTTSDEKVAELVNTVLTRKPKGHTHWSRRTLAVETGRSTTTVHRYMTLFGLQPHRSKRFKLSTDAFFIEKVRDIVG
LYLNPPDHALVLCVDEKSQVQALERTQPVLPMGLGYVEGITHDDVRHGTTPLFAALDVANGSVITQCKPSTAIRNFSRSC
DM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27235; Mature: 27103

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPAKPLVVSADDRLQLESMARSQSLPAALSRRAQMILRMADGEPQTTIAHRYGVSRPT
CCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
VTLWRTRYRERGIAGLHNELKPGRPRTTSDEKVAELVNTVLTRKPKGHTHWSRRTLAVET
HHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
GRSTTTVHRYMTLFGLQPHRSKRFKLSTDAFFIEKVRDIVGLYLNPPDHALVLCVDEKSQ
CCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHEEECCCCCEEEEEECCHHH
VQALERTQPVLPMGLGYVEGITHDDVRHGTTPLFAALDVANGSVITQCKPSTAIRNFSRS
HHHHHHCCCCCCCCCHHHCCCCCCCHHCCCCHHEEEEECCCCCEEEECCCHHHHHHHHHH
CDM
CCC
>Mature Secondary Structure 
GRPAKPLVVSADDRLQLESMARSQSLPAALSRRAQMILRMADGEPQTTIAHRYGVSRPT
CCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
VTLWRTRYRERGIAGLHNELKPGRPRTTSDEKVAELVNTVLTRKPKGHTHWSRRTLAVET
HHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
GRSTTTVHRYMTLFGLQPHRSKRFKLSTDAFFIEKVRDIVGLYLNPPDHALVLCVDEKSQ
CCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHEEECCCCCEEEEEECCHHH
VQALERTQPVLPMGLGYVEGITHDDVRHGTTPLFAALDVANGSVITQCKPSTAIRNFSRS
HHHHHHCCCCCCCCCHHHCCCCCCCHHCCCCHHEEEEECCCCCEEEECCCHHHHHHHHHH
CDM
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA