Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625399
Identifier: 84625399
GI number: 84625399
Start: 4232553
End: 4234097
Strand: Reverse
Name: 84625399
Synonym: XOO_3742
Alternate gene names: NA
Gene position: 4234097-4232553 (Counterclockwise)
Preceding gene: 84625400
Following gene: 84625398
Centisome position: 85.71
GC content: 61.36
Gene sequence:
>1545_bases ATGGGCCCGCAACCGTCGGCAACGCCCCCCGGCGGGCTCAGCTGGAGCCAGTTTCGCGCGATGGCCGCCGATGTCGGCAG CTGGGCCTGGGGCACCGTGCAAGGTGCGTTCAACGAGAAGGCTTCGCTGTCGCAGATCCTGGTCGATGCGGTGATCGGGA TGATCCCGTTGCTGGGGGATGTCACGGCCGTGCGCGACATCATCGCCGTGGTGATCCGCCTGATCGACGATCCGGACGCG CGTGAAAGCGTCTGGGAATGGGTACTGCTGGTCGTGCTGGTCTTTGCCTTGATCCCGGTCGTGGGGGGCGTCATCAAGGG CGTCGGGCGCATCCTGTGCAAGGTGTTCAAGGCCGCGGCCGAGCTGACCGGCGCTGCCCGGGCGGCCCACCTGCTGCAAG GCACCAGGGACATCATCGCCTTCCTCAACCGCATCGGCAGGGGCAATGCCGATGCGTGGCTGTTGAGCCTGAAATTTGCC GACTATCAATCGCAGATCCTGGACCGCTTCGCGGCCTTGACCAATACGATGGCCTTGGTCATGGCCAAGTTCAAAAAGCA CATGGGGGCGCTGCTGCCGGGCGTTCTGGCCCAGCGGATCGACGCGCTGACCCAGGGCTTGAGCACCTTGCGCGAGATCG GCCAGCGGATGATTCCCAATGCCATCAAGGAACTGGATCAACAGCTGCGGGAGTTGCAGGCCTACGTGCGCAGCGGTGGG GAAACCACCAGCCGCGTGGTACTGCACCGGGTGGCGACGGGAGAACGCACCATCACGCGTGCGGACGAAGCGCGTCTGGT CGAAGATGGTGTATTGCCTGTGCGGTCTGGTCGGGGTGGGTTCAAGCAGAATCCGGCGTTGGTGGCGCGGCCAAAAGAAT GGGAACATCTCTACAAACCTGAGCATGGCTATCCCAATCTGGCCGATCCGTCTCGCGCTCTGGGTGACTTTCACTCAGCA GTGCAAGCTTATTCAGGCAAGATGATCAACCGACAGCTGCATGATGGCGAACATTTCTTTCGTGCTTTTGGCGAGGGAGG CGAGACGCACGGTGTAAAAATAAAAGAGTCTGTTGCGGGCGGCGTCTGGTGGGGCATCGGTGAAGCCCCCAAAAGCGCGC AGGAATGGCGCCCATCCACCGCAGTCCTGGACGAATTCAACCGCAACGGTTTCCTTGTCACCGGCAAGGTGGTTGGAGAT GGGGGCCCCAAGGCAGTCGTTGGGACCGTAGCTGAGCAAACCGGTACAAAGCTTCCTGGGCAATATCTGCCGGGGGGTGC GACGCAGGCGTTCTTTTTCTTGGATCAATCTGTCGCCGATCACCTGACAGCGCTAGGTGAACGCGCAATCGCCGAAAAAA GGCTGTTGAACTGGGTCGATCCGGCCAGTGGCATGCACTTTGAAATCAGGCCAAGCGGCTGGAAGGACGTCAATGGCATC ATCGGCTATCTGCACACGCCTGGTCCAGGCATGGTCGCAATCGTGCGGCTTGGCGAGCGCGAACAGGCAACCAAGGAGCA TCGTCAAGTGGTGGTTTCGCCATGA
Upstream 100 bases:
>100_bases CCCCCAACGACGCCGTCGATCCTTCCGCAACCCAGTTGGATGGGGTGATCGGCAAATACGCAATTCCTCCGGCTGGCGAT ACCGACAAGGAAGTGTCCTG
Downstream 100 bases:
>100_bases ATATCAATTTACCCGAAGGCCTGCTGTTGCCCAACGAGCTTGAGCGTCGGCAGATGTTCCACCAACTGAAGAAGCAATCT TCCTTCACCGCATGGAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MGPQPSATPPGGLSWSQFRAMAADVGSWAWGTVQGAFNEKASLSQILVDAVIGMIPLLGDVTAVRDIIAVVIRLIDDPDA RESVWEWVLLVVLVFALIPVVGGVIKGVGRILCKVFKAAAELTGAARAAHLLQGTRDIIAFLNRIGRGNADAWLLSLKFA DYQSQILDRFAALTNTMALVMAKFKKHMGALLPGVLAQRIDALTQGLSTLREIGQRMIPNAIKELDQQLRELQAYVRSGG ETTSRVVLHRVATGERTITRADEARLVEDGVLPVRSGRGGFKQNPALVARPKEWEHLYKPEHGYPNLADPSRALGDFHSA VQAYSGKMINRQLHDGEHFFRAFGEGGETHGVKIKESVAGGVWWGIGEAPKSAQEWRPSTAVLDEFNRNGFLVTGKVVGD GGPKAVVGTVAEQTGTKLPGQYLPGGATQAFFFLDQSVADHLTALGERAIAEKRLLNWVDPASGMHFEIRPSGWKDVNGI IGYLHTPGPGMVAIVRLGEREQATKEHRQVVVSP
Sequences:
>Translated_514_residues MGPQPSATPPGGLSWSQFRAMAADVGSWAWGTVQGAFNEKASLSQILVDAVIGMIPLLGDVTAVRDIIAVVIRLIDDPDA RESVWEWVLLVVLVFALIPVVGGVIKGVGRILCKVFKAAAELTGAARAAHLLQGTRDIIAFLNRIGRGNADAWLLSLKFA DYQSQILDRFAALTNTMALVMAKFKKHMGALLPGVLAQRIDALTQGLSTLREIGQRMIPNAIKELDQQLRELQAYVRSGG ETTSRVVLHRVATGERTITRADEARLVEDGVLPVRSGRGGFKQNPALVARPKEWEHLYKPEHGYPNLADPSRALGDFHSA VQAYSGKMINRQLHDGEHFFRAFGEGGETHGVKIKESVAGGVWWGIGEAPKSAQEWRPSTAVLDEFNRNGFLVTGKVVGD GGPKAVVGTVAEQTGTKLPGQYLPGGATQAFFFLDQSVADHLTALGERAIAEKRLLNWVDPASGMHFEIRPSGWKDVNGI IGYLHTPGPGMVAIVRLGEREQATKEHRQVVVSP >Mature_513_residues GPQPSATPPGGLSWSQFRAMAADVGSWAWGTVQGAFNEKASLSQILVDAVIGMIPLLGDVTAVRDIIAVVIRLIDDPDAR ESVWEWVLLVVLVFALIPVVGGVIKGVGRILCKVFKAAAELTGAARAAHLLQGTRDIIAFLNRIGRGNADAWLLSLKFAD YQSQILDRFAALTNTMALVMAKFKKHMGALLPGVLAQRIDALTQGLSTLREIGQRMIPNAIKELDQQLRELQAYVRSGGE TTSRVVLHRVATGERTITRADEARLVEDGVLPVRSGRGGFKQNPALVARPKEWEHLYKPEHGYPNLADPSRALGDFHSAV QAYSGKMINRQLHDGEHFFRAFGEGGETHGVKIKESVAGGVWWGIGEAPKSAQEWRPSTAVLDEFNRNGFLVTGKVVGDG GPKAVVGTVAEQTGTKLPGQYLPGGATQAFFFLDQSVADHLTALGERAIAEKRLLNWVDPASGMHFEIRPSGWKDVNGII GYLHTPGPGMVAIVRLGEREQATKEHRQVVVSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55634; Mature: 55502
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPQPSATPPGGLSWSQFRAMAADVGSWAWGTVQGAFNEKASLSQILVDAVIGMIPLLGD CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VTAVRDIIAVVIRLIDDPDARESVWEWVLLVVLVFALIPVVGGVIKGVGRILCKVFKAAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELTGAARAAHLLQGTRDIIAFLNRIGRGNADAWLLSLKFADYQSQILDRFAALTNTMALV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH MAKFKKHMGALLPGVLAQRIDALTQGLSTLREIGQRMIPNAIKELDQQLRELQAYVRSGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ETTSRVVLHRVATGERTITRADEARLVEDGVLPVRSGRGGFKQNPALVARPKEWEHLYKP CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCHHHHHHCCC EHGYPNLADPSRALGDFHSAVQAYSGKMINRQLHDGEHFFRAFGEGGETHGVKIKESVAG CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCC GVWWGIGEAPKSAQEWRPSTAVLDEFNRNGFLVTGKVVGDGGPKAVVGTVAEQTGTKLPG CCEECCCCCCCCHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCC QYLPGGATQAFFFLDQSVADHLTALGERAIAEKRLLNWVDPASGMHFEIRPSGWKDVNGI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC IGYLHTPGPGMVAIVRLGEREQATKEHRQVVVSP EEEEECCCCCEEEEEECCCHHHHHHHHCEEECCC >Mature Secondary Structure GPQPSATPPGGLSWSQFRAMAADVGSWAWGTVQGAFNEKASLSQILVDAVIGMIPLLGD CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VTAVRDIIAVVIRLIDDPDARESVWEWVLLVVLVFALIPVVGGVIKGVGRILCKVFKAAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELTGAARAAHLLQGTRDIIAFLNRIGRGNADAWLLSLKFADYQSQILDRFAALTNTMALV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH MAKFKKHMGALLPGVLAQRIDALTQGLSTLREIGQRMIPNAIKELDQQLRELQAYVRSGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ETTSRVVLHRVATGERTITRADEARLVEDGVLPVRSGRGGFKQNPALVARPKEWEHLYKP CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCHHHHHHCCC EHGYPNLADPSRALGDFHSAVQAYSGKMINRQLHDGEHFFRAFGEGGETHGVKIKESVAG CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCC GVWWGIGEAPKSAQEWRPSTAVLDEFNRNGFLVTGKVVGDGGPKAVVGTVAEQTGTKLPG CCEECCCCCCCCHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCC QYLPGGATQAFFFLDQSVADHLTALGERAIAEKRLLNWVDPASGMHFEIRPSGWKDVNGI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC IGYLHTPGPGMVAIVRLGEREQATKEHRQVVVSP EEEEECCCCCEEEEEECCCHHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA