Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625398
Identifier: 84625398
GI number: 84625398
Start: 4231477
End: 4232556
Strand: Reverse
Name: 84625398
Synonym: XOO_3741
Alternate gene names: NA
Gene position: 4232556-4231477 (Counterclockwise)
Preceding gene: 84625399
Following gene: 84625397
Centisome position: 85.68
GC content: 51.3
Gene sequence:
>1080_bases ATGAATATCAATTTACCCGAAGGCCTGCTGTTGCCCAACGAGCTTGAGCGTCGGCAGATGTTCCACCAACTGAAGAAGCA ATCTTCCTTCACCGCATGGAATCGACTGTTTGAGATGTATCAGGCGTGGGCCGACGTTGCCGAGAAAAGTGTCAGGGAGG CAGATGGCAAGGGTTGGCTGGATGAAAGCGGAATTAGCGAGTCTGATTACGTCTCAATTCTAAAAGGACTGGCTCATCAG GAAGAGGGTGTCCGCAGATTAAGGAAAGGAGATAAGCGCGTCTTCAAGTTCGATGCCAATGGCGAATTTGTCATGGCGAA TCGTATCGTTAGTTACTGGCTTGAGCTGCTATGGAGGATCGATGTCGGCGAAAATAGGATAAAAAAATCTTTAACCCCAT TTTGGGATGAGTTCTGTGATCTGCTGCGGATCCTTGTAAGCTTTAGAACGCAGATATGGCTCAATATAATTGAGGGTCGT TATTTTGAAGATCCCGCACCAAACATTTATGGGGATTGGTTTCGAGACAATGTATCAAGAATGAATTTCCCTGCTGTTAT TCCTGATGTTCCCAATCCCGTAAAAAATACTTTGATTGCGACTGGCAGCCGGATTCCATTTTCAGGAATATGGGAGCCGG TGGATGCGCCAAAGCCAAAGAAATTCAGCCTATTTTCCAAGCCTGACGTGCCAAACGGCTTCATTCCTTACATTGCGGCA ATGAATTACTTGCACGGCGGCTCAAACGCTCCGCAGGCAAGTCAGGAAACGGCGCATGAAGTACTCAACATCGACGTCGT CTGGCGCCTGATCTGGCGCGACGACCGTTACGAAGATGGCACCATTCCCGATGAGGAAGCCGAGTACGTCTTCATGAAAC CACTGGCCAGCGCGCCGTCCGAGGACAGCGTTCGGCCCAATCGCCGCAGCGTCTCGGCCATGAGCGGCCAGCGCGCCTCG CATAGCGGCCGCTGGCTGGTGATGGACGACCTCAACGCGACCGCAGAGCTGAATGAGGGCGATGAACTTCCTTTGCACGA TGGCCGCAAGGTGCAGTGGATATTGGCCGACAACCAATAG
Upstream 100 bases:
>100_bases TCGGCTATCTGCACACGCCTGGTCCAGGCATGGTCGCAATCGTGCGGCTTGGCGAGCGCGAACAGGCAACCAAGGAGCAT CGTCAAGTGGTGGTTTCGCC
Downstream 100 bases:
>100_bases GCGAGCAGCAGGCCGCCCATACGCTGGTGGTCTTCGACCCGCAGGCACAGCGCCCGGACGGCGGCACGCTGCGCTTCCAC CGCGCCGCCATCAGCGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MNINLPEGLLLPNELERRQMFHQLKKQSSFTAWNRLFEMYQAWADVAEKSVREADGKGWLDESGISESDYVSILKGLAHQ EEGVRRLRKGDKRVFKFDANGEFVMANRIVSYWLELLWRIDVGENRIKKSLTPFWDEFCDLLRILVSFRTQIWLNIIEGR YFEDPAPNIYGDWFRDNVSRMNFPAVIPDVPNPVKNTLIATGSRIPFSGIWEPVDAPKPKKFSLFSKPDVPNGFIPYIAA MNYLHGGSNAPQASQETAHEVLNIDVVWRLIWRDDRYEDGTIPDEEAEYVFMKPLASAPSEDSVRPNRRSVSAMSGQRAS HSGRWLVMDDLNATAELNEGDELPLHDGRKVQWILADNQ
Sequences:
>Translated_359_residues MNINLPEGLLLPNELERRQMFHQLKKQSSFTAWNRLFEMYQAWADVAEKSVREADGKGWLDESGISESDYVSILKGLAHQ EEGVRRLRKGDKRVFKFDANGEFVMANRIVSYWLELLWRIDVGENRIKKSLTPFWDEFCDLLRILVSFRTQIWLNIIEGR YFEDPAPNIYGDWFRDNVSRMNFPAVIPDVPNPVKNTLIATGSRIPFSGIWEPVDAPKPKKFSLFSKPDVPNGFIPYIAA MNYLHGGSNAPQASQETAHEVLNIDVVWRLIWRDDRYEDGTIPDEEAEYVFMKPLASAPSEDSVRPNRRSVSAMSGQRAS HSGRWLVMDDLNATAELNEGDELPLHDGRKVQWILADNQ >Mature_359_residues MNINLPEGLLLPNELERRQMFHQLKKQSSFTAWNRLFEMYQAWADVAEKSVREADGKGWLDESGISESDYVSILKGLAHQ EEGVRRLRKGDKRVFKFDANGEFVMANRIVSYWLELLWRIDVGENRIKKSLTPFWDEFCDLLRILVSFRTQIWLNIIEGR YFEDPAPNIYGDWFRDNVSRMNFPAVIPDVPNPVKNTLIATGSRIPFSGIWEPVDAPKPKKFSLFSKPDVPNGFIPYIAA MNYLHGGSNAPQASQETAHEVLNIDVVWRLIWRDDRYEDGTIPDEEAEYVFMKPLASAPSEDSVRPNRRSVSAMSGQRAS HSGRWLVMDDLNATAELNEGDELPLHDGRKVQWILADNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41302; Mature: 41302
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINLPEGLLLPNELERRQMFHQLKKQSSFTAWNRLFEMYQAWADVAEKSVREADGKGWL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DESGISESDYVSILKGLAHQEEGVRRLRKGDKRVFKFDANGEFVMANRIVSYWLELLWRI CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHC DVGENRIKKSLTPFWDEFCDLLRILVSFRTQIWLNIIEGRYFEDPAPNIYGDWFRDNVSR CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHH MNFPAVIPDVPNPVKNTLIATGSRIPFSGIWEPVDAPKPKKFSLFSKPDVPNGFIPYIAA CCCCEECCCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHH MNYLHGGSNAPQASQETAHEVLNIDVVWRLIWRDDRYEDGTIPDEEAEYVFMKPLASAPS HHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCC EDSVRPNRRSVSAMSGQRASHSGRWLVMDDLNATAELNEGDELPLHDGRKVQWILADNQ CCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MNINLPEGLLLPNELERRQMFHQLKKQSSFTAWNRLFEMYQAWADVAEKSVREADGKGWL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DESGISESDYVSILKGLAHQEEGVRRLRKGDKRVFKFDANGEFVMANRIVSYWLELLWRI CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHC DVGENRIKKSLTPFWDEFCDLLRILVSFRTQIWLNIIEGRYFEDPAPNIYGDWFRDNVSR CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHH MNFPAVIPDVPNPVKNTLIATGSRIPFSGIWEPVDAPKPKKFSLFSKPDVPNGFIPYIAA CCCCEECCCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHH MNYLHGGSNAPQASQETAHEVLNIDVVWRLIWRDDRYEDGTIPDEEAEYVFMKPLASAPS HHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCC EDSVRPNRRSVSAMSGQRASHSGRWLVMDDLNATAELNEGDELPLHDGRKVQWILADNQ CCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA