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The map label for this gene is 84625397

Identifier: 84625397

GI number: 84625397

Start: 4229345

End: 4231501

Strand: Reverse

Name: 84625397

Synonym: XOO_3740

Alternate gene names: NA

Gene position: 4231501-4229345 (Counterclockwise)

Preceding gene: 84625398

Following gene: 84625395

Centisome position: 85.65

GC content: 70.47

Gene sequence:

>2157_bases
GTGGATATTGGCCGACAACCAATAGGCGAGCAGCAGGCCGCCCATACGCTGGTGGTCTTCGACCCGCAGGCACAGCGCCC
GGACGGCGGCACGCTGCGCTTCCACCGCGCCGCCATCAGCGAAGCCACCGATGCCATCACCGCCTTCGGTGCGCAGCAAC
GCATCACCCCGACGTGCGTCAGCACCAGCAGCTGGCACAGCGAGCAACTGAGCGCCGTCAGTGGCCAGGCCAGCGTCGAG
GCCGGCGAGCTGCCGGCGCTGGAGGTCTACGTGCAACCGCGCGCCGGGCGCTTTGCGCAGGCCGCCTGGGCCCAGGACGC
GGCGCAAGCGCGGCTGGATGCGCTGCGCGTCTCGGCGGTGCTGCACGCCGGCAGCGGCAGCGTGCGCACCCTGGCCGCCG
GCCAGACCTTCACGCTGAGCCAGCACCCGCAGTATGGCGATCAGCGCTACACCGTGCTGGCGCTGGAGCACAGCGCCCGC
AACAACCTCGACACCGGCATCGCGCGGCTGCTGGGCGCCGATGGCAGCGAGCGCGGGAGCTACCGCAACCGCTTCGTCGC
CGCCCCCGCAGCCACCCCGTTGCGCCCGCTGCCGCACGATCGCCCGCAGGTGCACGGCCCGCAGACCGCGCGCGTGGTTG
GCCTGCCCGATGCGGCGGTCACGCCCAACCGCGACCACCAGGTGCGCGTGCAGTTCGCCTGGCAGCGCGGCAGCGCCCCC
AATCCCGGCGGCCTGGGTGCCGACGACGGCCACGCCCCGGGCGATCAGCGCAGCGGCACCTGGGTGCCGGTGGTCGAGTG
GGTCGCCGGCCCCAACTGGGGTACGCACTTCCTGCCGCGCATCGGCACCGAGGTGCTGGTGGAGTTCCTGCACGGGGACA
TCGACCAACCCCGGATCACCGGGCAGCTGTACAACGGCGAAGTGGCCCCGCCGTTCGGCGGCGGGCTGCAGGCCGGGCAG
AGCAATCACCCCGGCACGCTCACCGGCCTGCACACCCAGGCCCACGATGGCAGCGGCACCCAGCAGTGGCTGCTGGACGA
CACTCCCGGCCAGCTGCGCACGCGCCTGTACACCAGCCTGGCCGACAGCACGCTGCAACTGGGCTATCTGCTGCAAGGCG
GCGGCGCCCACCGTGGCCCCTTGTACGGCCAGGGCTTCGCGCTGGCCACCCAGGGCTGGGGCAACGTGCATGCGGCGCAG
GGGCTGTTGCTGTCGACCACTGCCCGCGCCCAGGGTGCCTCGACCCAACTGGATGTCGCCGAGGCGGTGAGCCAGCTCAA
GGGCGCCGCCCGCACCGCCGACGCCTTGCACGCCACCTTGCAGGCCCAGCAGATGCCCGGGCTGGACGCACGCACCAGCG
TCAGCGACCTGCACCAAGCGATCGACCCGCAGGCGCAGGGCAAGTACAGCGGCAGCGTCGGCGGCCAACCGGCGACCAAG
CCCGCGGCCGGCAGCCGCCAGGGCCAGGCCCCGGTGGAGCGCTTCGCCGATGCGCGGCTGCTGGCCGAATCGCCGGACCA
CCTGGCCTGGACCACGCCCAACAGCGCGGCCAGCTACGCCGGCCAACAGCTGCAGCTGACGGTGCAGGACGACCTGCACG
CCAGCGCCGGCCAGACCCTGGCGGCGGTGGTGGGCGAGCACGCCGCGCTGTTTGCGCAGACCGGCCCGCTCAAGGCGATT
GCCGCCGCCGGCCCGGTGAGCCTGCAGGCGCACGGCGGCCCGCTGGAAATCCTTGCCGACCAGGCCGTGACGGTCACCGC
CACCGACACCCGCATCGACATCCTGGCCCAGCAGAAGATCGTGCTGCAGGCCGGCCGGACCTCCATCACCCTGGAAGGCG
GCAACATCACCTTCGCCTGCCCGGGCACGTTCACGGTCAAGGCCGGGCAGCATCCGTTTATGGGCGGGGAAGTTGCACCT
CTAAAACTTGAGAAACTTCCCGATACGAGATTGAAGCGTCCAGAAAGTTTCAGCCAAAAGATAACAATAAAAGGGCTAAC
GCCTAATCCATTCACTTTCCTGATTAGCCCCATCCCTCAGCCATGGAAGTTGCTTGCCATACGCAAAACGCGCTCTGGGC
AAGGTGTGCAGCGCAGCAGTGCCGTCGCCAGCCGCGGCAGCATCTGTTTCAGGTCGAATCGGCGGTTGAAGCGATAG

Upstream 100 bases:

>100_bases
CCTCGCATAGCGGCCGCTGGCTGGTGATGGACGACCTCAACGCGACCGCAGAGCTGAATGAGGGCGATGAACTTCCTTTG
CACGATGGCCGCAAGGTGCA

Downstream 100 bases:

>100_bases
GCCGCCTCGGCCAGGTAGCGCCTTGCATACTTGGCCTGGCCCACCGCATGGTAGGTCCCGCTGATGGCGCGTTTGACATT
GCCCAGCACCACATTCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VGR-Like Protein; Rhs Element Vgr Family; Rhs Accessory Genetic Element; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Family Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Rhs-Family Protein; Replication/Virulence Associated Protein; Type VI Secretion System VgrG Family Protein; VrgG Protein; ISXoo12 Transposase; VgrG Protein; Vgr Protein

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MDIGRQPIGEQQAAHTLVVFDPQAQRPDGGTLRFHRAAISEATDAITAFGAQQRITPTCVSTSSWHSEQLSAVSGQASVE
AGELPALEVYVQPRAGRFAQAAWAQDAAQARLDALRVSAVLHAGSGSVRTLAAGQTFTLSQHPQYGDQRYTVLALEHSAR
NNLDTGIARLLGADGSERGSYRNRFVAAPAATPLRPLPHDRPQVHGPQTARVVGLPDAAVTPNRDHQVRVQFAWQRGSAP
NPGGLGADDGHAPGDQRSGTWVPVVEWVAGPNWGTHFLPRIGTEVLVEFLHGDIDQPRITGQLYNGEVAPPFGGGLQAGQ
SNHPGTLTGLHTQAHDGSGTQQWLLDDTPGQLRTRLYTSLADSTLQLGYLLQGGGAHRGPLYGQGFALATQGWGNVHAAQ
GLLLSTTARAQGASTQLDVAEAVSQLKGAARTADALHATLQAQQMPGLDARTSVSDLHQAIDPQAQGKYSGSVGGQPATK
PAAGSRQGQAPVERFADARLLAESPDHLAWTTPNSAASYAGQQLQLTVQDDLHASAGQTLAAVVGEHAALFAQTGPLKAI
AAAGPVSLQAHGGPLEILADQAVTVTATDTRIDILAQQKIVLQAGRTSITLEGGNITFACPGTFTVKAGQHPFMGGEVAP
LKLEKLPDTRLKRPESFSQKITIKGLTPNPFTFLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR

Sequences:

>Translated_718_residues
MDIGRQPIGEQQAAHTLVVFDPQAQRPDGGTLRFHRAAISEATDAITAFGAQQRITPTCVSTSSWHSEQLSAVSGQASVE
AGELPALEVYVQPRAGRFAQAAWAQDAAQARLDALRVSAVLHAGSGSVRTLAAGQTFTLSQHPQYGDQRYTVLALEHSAR
NNLDTGIARLLGADGSERGSYRNRFVAAPAATPLRPLPHDRPQVHGPQTARVVGLPDAAVTPNRDHQVRVQFAWQRGSAP
NPGGLGADDGHAPGDQRSGTWVPVVEWVAGPNWGTHFLPRIGTEVLVEFLHGDIDQPRITGQLYNGEVAPPFGGGLQAGQ
SNHPGTLTGLHTQAHDGSGTQQWLLDDTPGQLRTRLYTSLADSTLQLGYLLQGGGAHRGPLYGQGFALATQGWGNVHAAQ
GLLLSTTARAQGASTQLDVAEAVSQLKGAARTADALHATLQAQQMPGLDARTSVSDLHQAIDPQAQGKYSGSVGGQPATK
PAAGSRQGQAPVERFADARLLAESPDHLAWTTPNSAASYAGQQLQLTVQDDLHASAGQTLAAVVGEHAALFAQTGPLKAI
AAAGPVSLQAHGGPLEILADQAVTVTATDTRIDILAQQKIVLQAGRTSITLEGGNITFACPGTFTVKAGQHPFMGGEVAP
LKLEKLPDTRLKRPESFSQKITIKGLTPNPFTFLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR
>Mature_718_residues
MDIGRQPIGEQQAAHTLVVFDPQAQRPDGGTLRFHRAAISEATDAITAFGAQQRITPTCVSTSSWHSEQLSAVSGQASVE
AGELPALEVYVQPRAGRFAQAAWAQDAAQARLDALRVSAVLHAGSGSVRTLAAGQTFTLSQHPQYGDQRYTVLALEHSAR
NNLDTGIARLLGADGSERGSYRNRFVAAPAATPLRPLPHDRPQVHGPQTARVVGLPDAAVTPNRDHQVRVQFAWQRGSAP
NPGGLGADDGHAPGDQRSGTWVPVVEWVAGPNWGTHFLPRIGTEVLVEFLHGDIDQPRITGQLYNGEVAPPFGGGLQAGQ
SNHPGTLTGLHTQAHDGSGTQQWLLDDTPGQLRTRLYTSLADSTLQLGYLLQGGGAHRGPLYGQGFALATQGWGNVHAAQ
GLLLSTTARAQGASTQLDVAEAVSQLKGAARTADALHATLQAQQMPGLDARTSVSDLHQAIDPQAQGKYSGSVGGQPATK
PAAGSRQGQAPVERFADARLLAESPDHLAWTTPNSAASYAGQQLQLTVQDDLHASAGQTLAAVVGEHAALFAQTGPLKAI
AAAGPVSLQAHGGPLEILADQAVTVTATDTRIDILAQQKIVLQAGRTSITLEGGNITFACPGTFTVKAGQHPFMGGEVAP
LKLEKLPDTRLKRPESFSQKITIKGLTPNPFTFLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75711; Mature: 75711

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGRQPIGEQQAAHTLVVFDPQAQRPDGGTLRFHRAAISEATDAITAFGAQQRITPTCV
CCCCCCCCCCHHHCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEE
STSSWHSEQLSAVSGQASVEAGELPALEVYVQPRAGRFAQAAWAQDAAQARLDALRVSAV
CCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEE
LHAGSGSVRTLAAGQTFTLSQHPQYGDQRYTVLALEHSARNNLDTGIARLLGADGSERGS
EECCCCCEEEEECCCEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCC
YRNRFVAAPAATPLRPLPHDRPQVHGPQTARVVGLPDAAVTPNRDHQVRVQFAWQRGSAP
CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCC
NPGGLGADDGHAPGDQRSGTWVPVVEWVAGPNWGTHFLPRIGTEVLVEFLHGDIDQPRIT
CCCCCCCCCCCCCCCCCCCCEEEEEHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
GQLYNGEVAPPFGGGLQAGQSNHPGTLTGLHTQAHDGSGTQQWLLDDTPGQLRTRLYTSL
EEEECCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
ADSTLQLGYLLQGGGAHRGPLYGQGFALATQGWGNVHAAQGLLLSTTARAQGASTQLDVA
HHCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCEEEEECCCCCCCCCCHHHH
EAVSQLKGAARTADALHATLQAQQMPGLDARTSVSDLHQAIDPQAQGKYSGSVGGQPATK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
PAAGSRQGQAPVERFADARLLAESPDHLAWTTPNSAASYAGQQLQLTVQDDLHASAGQTL
CCCCCCCCCCHHHHHHCCHHHHCCCCCEEEECCCCHHHCCCCEEEEEECCCCCCCCCCHH
AAVVGEHAALFAQTGPLKAIAAAGPVSLQAHGGPLEILADQAVTVTATDTRIDILAQQKI
HHHHCCHHEEEECCCCCEEEECCCCEEEEECCCCEEEEECCEEEEEECCCEEEEHHHCEE
VLQAGRTSITLEGGNITFACPGTFTVKAGQHPFMGGEVAPLKLEKLPDTRLKRPESFSQK
EEECCCEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCE
ITIKGLTPNPFTFLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR
EEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure
MDIGRQPIGEQQAAHTLVVFDPQAQRPDGGTLRFHRAAISEATDAITAFGAQQRITPTCV
CCCCCCCCCCHHHCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEE
STSSWHSEQLSAVSGQASVEAGELPALEVYVQPRAGRFAQAAWAQDAAQARLDALRVSAV
CCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEE
LHAGSGSVRTLAAGQTFTLSQHPQYGDQRYTVLALEHSARNNLDTGIARLLGADGSERGS
EECCCCCEEEEECCCEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCC
YRNRFVAAPAATPLRPLPHDRPQVHGPQTARVVGLPDAAVTPNRDHQVRVQFAWQRGSAP
CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCC
NPGGLGADDGHAPGDQRSGTWVPVVEWVAGPNWGTHFLPRIGTEVLVEFLHGDIDQPRIT
CCCCCCCCCCCCCCCCCCCCEEEEEHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
GQLYNGEVAPPFGGGLQAGQSNHPGTLTGLHTQAHDGSGTQQWLLDDTPGQLRTRLYTSL
EEEECCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
ADSTLQLGYLLQGGGAHRGPLYGQGFALATQGWGNVHAAQGLLLSTTARAQGASTQLDVA
HHCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCEEEEECCCCCCCCCCHHHH
EAVSQLKGAARTADALHATLQAQQMPGLDARTSVSDLHQAIDPQAQGKYSGSVGGQPATK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
PAAGSRQGQAPVERFADARLLAESPDHLAWTTPNSAASYAGQQLQLTVQDDLHASAGQTL
CCCCCCCCCCHHHHHHCCHHHHCCCCCEEEECCCCHHHCCCCEEEEEECCCCCCCCCCHH
AAVVGEHAALFAQTGPLKAIAAAGPVSLQAHGGPLEILADQAVTVTATDTRIDILAQQKI
HHHHCCHHEEEECCCCCEEEECCCCEEEEECCCCEEEEECCEEEEEECCCEEEEHHHCEE
VLQAGRTSITLEGGNITFACPGTFTVKAGQHPFMGGEVAPLKLEKLPDTRLKRPESFSQK
EEECCCEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCE
ITIKGLTPNPFTFLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR
EEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA