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The map label for this gene is ygeR [C]

Identifier: 84625395

GI number: 84625395

Start: 4226934

End: 4228208

Strand: Reverse

Name: ygeR [C]

Synonym: XOO_3738

Alternate gene names: 84625395

Gene position: 4228208-4226934 (Counterclockwise)

Preceding gene: 84625397

Following gene: 84625394

Centisome position: 85.59

GC content: 41.88

Gene sequence:

>1275_bases
ATGAATGATCTTGCCCTATACAAAATTAAGAGCGGCGATTCACTTGATAGCATTGCAAGGCAACATGGGACTTCTGTAGA
AGAAATATCCAAACTTAACAATATCAAGAATCCGAATATTATTCGCACAGGCCAACAGCTAAAAATGCCTAATAAAAAGG
CATGGTCATTGGCAAGCCAGGAAACAAAACCTCAATCTCCCCCGCCAACTTCAGTTCAATTTGTTTTGCTGGATCGATTA
TTGAATGCAATTGGCGACTTAAACTATCAAATAATCCACAAAGAGACCGGAAGGAAGATAAATGGCAAGACCACAGAGTA
TGGTCTGACAGAGGTAATTACCGGAAATATAAATGACACGATCGAGTTGTGCGTCGCACGCGCAGGAGGAGGTTTCAAAA
AGATATATGAGACCTATATTGCCGCCTCGCGAAAAATAGTTACTGCTCAAAGTCCGTCAATTAGATTCAAAGCCAAAACT
GATAGGCATGATGGCGCATCAGAAGCTGGCGAAAAAATTGGCAGAGATAAGAATGGACACCCTCTGATTGTTATTGATAA
ACAGGATGTTGAGCTAGACTTTCTTGACCGCTACACTGGGGCGAAGCTTTCCGATCAAGATATCCAAGACGCAGCCAAAG
AACTCAGATGCGAGCCGGGCCTGATTTTTGCTATCGCAACACAAGAGTCGTCTCAATCCTCATTTATTGATTTGGATGGG
AATAAAATCCCTGCAATTCTTTATGAGCGACATTGGTTTAGAAAACTTACAAATCCTAGCAAGAAGCAGCCTAGTCCTTA
CGAAGCGACGCACCCCAATATTTGCGGCCCCGCGTACAAACGAGCCAAAAAAAATAAGAAAGGCGAGTATGTGGAAAAGA
AGACGGGTAATATCGTTCAAGAAGATGACATATATGGCTCGCCCGGTATTCACCAATACAAGAGGCTGCTTATAGCCTAC
AAGCTAAACCAAGAGGCAGCATTGCAATCTTGCTCTTGGGGTAAATTTCAGATTATGGGGTTCAATTATAAGGTCGCTGG
CTTTGCATCAGTTAAAGAATTTACCAAGGCCATGTCTTTGAGTGACGCGGAACACATGAAAGCATTTTTAAAATTTGCAA
AATCAAACCCAACTCTTCTTGAGGGCCTTCAAAATAAAGACTACGAAAAGATTGCAGAAGGCCACAATGGTGGTAGCTGG
AGACATATCAATCCAGATTATGCAACCAATATCGAGAAATATTACAATGACTACACGCGCACAAGCAAAAAATAG

Upstream 100 bases:

>100_bases
CTGATAAAAAAGAGGAGGATTTGACGGTTTTCGTCAAAGAAGGGAATTGGCAGTTTGATGAAGCGCTGGATGATGACTTG
GAATTTGATGAGGAATCCTG

Downstream 100 bases:

>100_bases
CGTAAGCATATCTGCCTTAGTAACAATGCTGCTGCATGCATCAATTTTACCGGCGTGCGCCCAGAATAATTACAAGGAGG
ATGGCTCTCTTTGCCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Related Cell Wall Hydrolase; Bacteriophage-Acquired Protein; Lytic Transglycosylase Catalytic; Phage-Like Protein; DNA-Directed RNA Polymerase Beta Chain; LysM Domain Protein

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MNDLALYKIKSGDSLDSIARQHGTSVEEISKLNNIKNPNIIRTGQQLKMPNKKAWSLASQETKPQSPPPTSVQFVLLDRL
LNAIGDLNYQIIHKETGRKINGKTTEYGLTEVITGNINDTIELCVARAGGGFKKIYETYIAASRKIVTAQSPSIRFKAKT
DRHDGASEAGEKIGRDKNGHPLIVIDKQDVELDFLDRYTGAKLSDQDIQDAAKELRCEPGLIFAIATQESSQSSFIDLDG
NKIPAILYERHWFRKLTNPSKKQPSPYEATHPNICGPAYKRAKKNKKGEYVEKKTGNIVQEDDIYGSPGIHQYKRLLIAY
KLNQEAALQSCSWGKFQIMGFNYKVAGFASVKEFTKAMSLSDAEHMKAFLKFAKSNPTLLEGLQNKDYEKIAEGHNGGSW
RHINPDYATNIEKYYNDYTRTSKK

Sequences:

>Translated_424_residues
MNDLALYKIKSGDSLDSIARQHGTSVEEISKLNNIKNPNIIRTGQQLKMPNKKAWSLASQETKPQSPPPTSVQFVLLDRL
LNAIGDLNYQIIHKETGRKINGKTTEYGLTEVITGNINDTIELCVARAGGGFKKIYETYIAASRKIVTAQSPSIRFKAKT
DRHDGASEAGEKIGRDKNGHPLIVIDKQDVELDFLDRYTGAKLSDQDIQDAAKELRCEPGLIFAIATQESSQSSFIDLDG
NKIPAILYERHWFRKLTNPSKKQPSPYEATHPNICGPAYKRAKKNKKGEYVEKKTGNIVQEDDIYGSPGIHQYKRLLIAY
KLNQEAALQSCSWGKFQIMGFNYKVAGFASVKEFTKAMSLSDAEHMKAFLKFAKSNPTLLEGLQNKDYEKIAEGHNGGSW
RHINPDYATNIEKYYNDYTRTSKK
>Mature_424_residues
MNDLALYKIKSGDSLDSIARQHGTSVEEISKLNNIKNPNIIRTGQQLKMPNKKAWSLASQETKPQSPPPTSVQFVLLDRL
LNAIGDLNYQIIHKETGRKINGKTTEYGLTEVITGNINDTIELCVARAGGGFKKIYETYIAASRKIVTAQSPSIRFKAKT
DRHDGASEAGEKIGRDKNGHPLIVIDKQDVELDFLDRYTGAKLSDQDIQDAAKELRCEPGLIFAIATQESSQSSFIDLDG
NKIPAILYERHWFRKLTNPSKKQPSPYEATHPNICGPAYKRAKKNKKGEYVEKKTGNIVQEDDIYGSPGIHQYKRLLIAY
KLNQEAALQSCSWGKFQIMGFNYKVAGFASVKEFTKAMSLSDAEHMKAFLKFAKSNPTLLEGLQNKDYEKIAEGHNGGSW
RHINPDYATNIEKYYNDYTRTSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47616; Mature: 47616

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLALYKIKSGDSLDSIARQHGTSVEEISKLNNIKNPNIIRTGQQLKMPNKKAWSLASQ
CCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEECCHHHCCCCHHHHCCCCC
ETKPQSPPPTSVQFVLLDRLLNAIGDLNYQIIHKETGRKINGKTTEYGLTEVITGNINDT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCHH
IELCVARAGGGFKKIYETYIAASRKIVTAQSPSIRFKAKTDRHDGASEAGEKIGRDKNGH
HHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCC
PLIVIDKQDVELDFLDRYTGAKLSDQDIQDAAKELRCEPGLIFAIATQESSQSSFIDLDG
EEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECC
NKIPAILYERHWFRKLTNPSKKQPSPYEATHPNICGPAYKRAKKNKKGEYVEKKTGNIVQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCEE
EDDIYGSPGIHQYKRLLIAYKLNQEAALQSCSWGKFQIMGFNYKVAGFASVKEFTKAMSL
CCCCCCCCCHHHHHHHHHHEECCHHHHHHCCCCCEEEEEEECEEECCHHHHHHHHHHHCC
SDAEHMKAFLKFAKSNPTLLEGLQNKDYEKIAEGHNGGSWRHINPDYATNIEKYYNDYTR
CCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHH
TSKK
CCCC
>Mature Secondary Structure
MNDLALYKIKSGDSLDSIARQHGTSVEEISKLNNIKNPNIIRTGQQLKMPNKKAWSLASQ
CCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEECCHHHCCCCHHHHCCCCC
ETKPQSPPPTSVQFVLLDRLLNAIGDLNYQIIHKETGRKINGKTTEYGLTEVITGNINDT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCHH
IELCVARAGGGFKKIYETYIAASRKIVTAQSPSIRFKAKTDRHDGASEAGEKIGRDKNGH
HHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCC
PLIVIDKQDVELDFLDRYTGAKLSDQDIQDAAKELRCEPGLIFAIATQESSQSSFIDLDG
EEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECC
NKIPAILYERHWFRKLTNPSKKQPSPYEATHPNICGPAYKRAKKNKKGEYVEKKTGNIVQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCEE
EDDIYGSPGIHQYKRLLIAYKLNQEAALQSCSWGKFQIMGFNYKVAGFASVKEFTKAMSL
CCCCCCCCCHHHHHHHHHHEECCHHHHHHCCCCCEEEEEEECEEECCHHHHHHHHHHHCC
SDAEHMKAFLKFAKSNPTLLEGLQNKDYEKIAEGHNGGSWRHINPDYATNIEKYYNDYTR
CCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHH
TSKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA