Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625357
Identifier: 84625357
GI number: 84625357
Start: 4179597
End: 4180763
Strand: Reverse
Name: 84625357
Synonym: XOO_3700
Alternate gene names: NA
Gene position: 4180763-4179597 (Counterclockwise)
Preceding gene: 84625358
Following gene: 84625356
Centisome position: 84.63
GC content: 64.52
Gene sequence:
>1167_bases ATGAGCGCACACACGCCCGCGGCTGCCACTGCCACTGCAAGCGCACCACCAAAGCGCGAACGCTTCCTCTCGCTGGACGT GTTTCGCGGTCTGACCATCTTCCTGATGATTCTGGTCAACACCGCAGGGCCTGGCGCGCAGGCATACGCGCAGCTCACCC ACGCGGCCTGGTTCGGCTTCACGCTGGCCGATCTGGTGTTTCCCTCGTTTCTGTTCGCTGTTGGTAGTGCGATGAGTTTT GCGCTGGCAACGAATATGCCACATCTGCAGTTCCTGGGCCGCGTGAGCAAGCGCGCTGCGCTGATCGCCCTGTGCGGTGT GCTGATGTACTGGTTCCCGTTTTTTCATCTGCAGCCCGATGGTGGATGGGCATTCACGACGGTCGATCAAGTGCGCCTGA CCGGCGTCCTGCAACGGATCGGCCTGTGCTACCTGGCCGCAGCACTGCTGGTGCGCTATCTGCCGCCACGCGGCATCGCG CCTGCCTGCGTAGCACTGCTGTTGGGCTATTGGGCGTTGTTGCATGTCTTCGGCCAGCCCGGCGCGGAGTTGAGCAAGAC CGGCAATGCCGGCACTTGTCTGGATCTGTGGCTTTACGGGCGCGAGCATCTGTATCGCAAGGACGGCGGTTTCGATCCCG AGGGCCTGCTTGGCTCGCTGTCGGCCACGGTCAACGTGCTCGCCGGTTATCTGTGTGGGCGCTTCCTGCAGCGCCACGGC AAGACCACTGCCAGCACGCGCAGCTTGTTGTTGGCGGGCGCAGGTCTGGTGCTGCTGGCGCTGCTCTGGGCGCCCGCCTG GCCGTTGTCGAAGAAACTCTGGAGTGGGTCGTTTGTCGCTTGCACGGTCGGCCTGGACCTCCTGGCGTTGGGCGTCCTGG TGTACCTGCTGGAATTGCGCGGTTGGCTTGGCGGCAGCGGCTTCTTCACCGTCCTGGGGCGCAACCCGTTGGCGATCTAC CTGTTCTCCGAATTGTTCGTGGTGGTGTTGCGGCGCATCCCGGCCGGCAGCTCCGGCCTGGACCTGTACGGCTGGGCCGG CATCCGCGTGTTCCAGACCATTGCGCCGGGGCCATTCGGGTCGCTGCTGTGCGCGCTGAGCTACACGCTGGTGTGCTGCG CCGTGGGCTGGTGGATGGACCGGCGGCGTTGGTATCTGCGGCTGTAA
Upstream 100 bases:
>100_bases TGCTCATGCAGACGCGCAGTTGCGTCGATGCCAGAGCCCAGGGCCCGAAGCGTGCGTGCGCATACCGCATCCACCTCGAT GACATGGACGAGGGCGTGCG
Downstream 100 bases:
>100_bases TGGCACCGCCAATGCGGCAATGCGCCAGGCTGCAAAGCACTGACCAGCGCTGGCCACGCCTGCACGATGCCGCCCCGGGG GCGGCGGTCTGGGTGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSAHTPAAATATASAPPKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGFTLADLVFPSFLFAVGSAMSF ALATNMPHLQFLGRVSKRAALIALCGVLMYWFPFFHLQPDGGWAFTTVDQVRLTGVLQRIGLCYLAAALLVRYLPPRGIA PACVALLLGYWALLHVFGQPGAELSKTGNAGTCLDLWLYGREHLYRKDGGFDPEGLLGSLSATVNVLAGYLCGRFLQRHG KTTASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGVLVYLLELRGWLGGSGFFTVLGRNPLAIY LFSELFVVVLRRIPAGSSGLDLYGWAGIRVFQTIAPGPFGSLLCALSYTLVCCAVGWWMDRRRWYLRL
Sequences:
>Translated_388_residues MSAHTPAAATATASAPPKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGFTLADLVFPSFLFAVGSAMSF ALATNMPHLQFLGRVSKRAALIALCGVLMYWFPFFHLQPDGGWAFTTVDQVRLTGVLQRIGLCYLAAALLVRYLPPRGIA PACVALLLGYWALLHVFGQPGAELSKTGNAGTCLDLWLYGREHLYRKDGGFDPEGLLGSLSATVNVLAGYLCGRFLQRHG KTTASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGVLVYLLELRGWLGGSGFFTVLGRNPLAIY LFSELFVVVLRRIPAGSSGLDLYGWAGIRVFQTIAPGPFGSLLCALSYTLVCCAVGWWMDRRRWYLRL >Mature_387_residues SAHTPAAATATASAPPKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGFTLADLVFPSFLFAVGSAMSFA LATNMPHLQFLGRVSKRAALIALCGVLMYWFPFFHLQPDGGWAFTTVDQVRLTGVLQRIGLCYLAAALLVRYLPPRGIAP ACVALLLGYWALLHVFGQPGAELSKTGNAGTCLDLWLYGREHLYRKDGGFDPEGLLGSLSATVNVLAGYLCGRFLQRHGK TTASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGVLVYLLELRGWLGGSGFFTVLGRNPLAIYL FSELFVVVLRRIPAGSSGLDLYGWAGIRVFQTIAPGPFGSLLCALSYTLVCCAVGWWMDRRRWYLRL
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=377, Percent_Identity=29.1777188328912, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24639786, Length=375, Percent_Identity=31.4666666666667, Blast_Score=118, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42071; Mature: 41940
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHTPAAATATASAPPKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TLADLVFPSFLFAVGSAMSFALATNMPHLQFLGRVSKRAALIALCGVLMYWFPFFHLQPD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GGWAFTTVDQVRLTGVLQRIGLCYLAAALLVRYLPPRGIAPACVALLLGYWALLHVFGQP CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC GAELSKTGNAGTCLDLWLYGREHLYRKDGGFDPEGLLGSLSATVNVLAGYLCGRFLQRHG CCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KTTASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGVLVYLLELR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH GWLGGSGFFTVLGRNPLAIYLFSELFVVVLRRIPAGSSGLDLYGWAGIRVFQTIAPGPFG HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCHH SLLCALSYTLVCCAVGWWMDRRRWYLRL HHHHHHHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure SAHTPAAATATASAPPKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TLADLVFPSFLFAVGSAMSFALATNMPHLQFLGRVSKRAALIALCGVLMYWFPFFHLQPD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GGWAFTTVDQVRLTGVLQRIGLCYLAAALLVRYLPPRGIAPACVALLLGYWALLHVFGQP CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC GAELSKTGNAGTCLDLWLYGREHLYRKDGGFDPEGLLGSLSATVNVLAGYLCGRFLQRHG CCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KTTASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGVLVYLLELR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH GWLGGSGFFTVLGRNPLAIYLFSELFVVVLRRIPAGSSGLDLYGWAGIRVFQTIAPGPFG HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCHH SLLCALSYTLVCCAVGWWMDRRRWYLRL HHHHHHHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA