Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625358
Identifier: 84625358
GI number: 84625358
Start: 4180897
End: 4182669
Strand: Reverse
Name: 84625358
Synonym: XOO_3701
Alternate gene names: NA
Gene position: 4182669-4180897 (Counterclockwise)
Preceding gene: 84625359
Following gene: 84625357
Centisome position: 84.67
GC content: 64.3
Gene sequence:
>1773_bases ATGGATCGACAGCAAGCGCGTGCTGCAGAAGCAGATCCTGACGCGCATGCGCGAGTTGGGCATGCAGCCGGTGCTGCCGG CATTTGCCGGCTACGTGCCCAAGGCGTTCGCGCAGGCGCATCCGCATGCGCGCATCTACCGCATGCGCGCATCTACCGCA TGCGTGCCTGGGAAGGCTTTCACGAAACCTATTGGCTGGATCCGCGCGATCCGCTGTTTGCCAAGGTCGCGCGACGGTTC CTTGAGCTGTACACTCAGGCCTACGGCGCAGGCGAGTTCTACCTGGCCGATGCCTTCAACGAAATGCTGCCGCCGGTGGC CGACGACGGCAGCGACGTGGCCGCCGCCAAGTACGGCGACAGCATCGCCAACTTCGATGCCGCACGCGCCAAGGCGGTGC CGCCAGCGCAACGCGATGCCCGCCTGGCCGCCTACGGGCAGGCGTTGTACCGCTCCATCGCGCAGGTGAATCCGAAGGCC ACCTGGGTGATGCAGGGCTGGCTGTTCGGTGCCGACTGCGCGTTCTGGCAACCGCAGGCGATCGCTGCGTTTCTCGGCAA GGTGCCCGACGCGCGCTTGATGGTGCTGGACATCGGCAATGACCGCTATCCCGGCACTTGGAAGGCATCGCAGGCGTTCG ACAACAAACAATGGATCTACGGCTACGTGCACAACTACGGTGCCAGCAATCCGCTGTATGGCGATGTCGCGTTCTATCGG CAGGATCTGCAAGCCTTGCTGGCCGATCCGGGCAAACGCAATCTGCGCGGCTTCGGCGTGTTTCCGGAAGGCCTGCACAG CAACTCGGTGGTCTACGAGTATCTCTACGCGCTGGCCTGGGAAGGCCCGCAACACCCGTGGTCGCAGTGGCTCGCGCAGT ATCTGCGCGCGCGCTATGGCCGCAGCGATGCGGCATTGCTCAGCGCATGGACTGACCTGGGAGCAGGCATCTACCAGACC CGCTACTGGTCGCCACGCTGGTGGAACACGCATGCCGGTGCCTACCTGCTGTTCAAGCGGCCGACTGCCGACATCGTCAA TTTCGACGATCGTCCCGGCGATCCGCAGCGCTTGCGCAGCGCCATCGATGCATTGCTGCAGCAGGCCGACCGTTATGCCG ACGCGCCGTTGTACCGCTACGATCTGATCGAAGACGCGCGCCACTACCTGAGCCTGCAGGCCGACCGTCAATTGCAGACG GTGGTGCAGGCCTACAACGCCGGCGATTTCGCGCGTGGCGATGCACAGCTGGCACGCACCACGCAACTGGTACAGGGACT GGATGCGCTGGTCGGCGGTCAACACGAAACCTTGGCCGCGTGGACCGGCCAGGCCGCCGCTGCGGTTGGCAACGATGCCC GATTGCTGCGTGCCTATGTCGGCAATGCGCGTGCGCAGGTCAGTGTCTGGGGCGGCGACGGCAATCTTGCCGATTACGCG TCCAAGGCGTGGCAGGGCATGTACGCGGATTTCTATCTGCAGCGCTGGACGCGCTTTCTCAGCGCCTACCGTGCCGCACG TAAGGCCGGTACGCCGTTCGATGCGCAGACAGTGGATCAGCAGCTTGCAACATGGGAACGCCAATGGGCCGCGCAGGACG AGGTGCCGAAGCCTCGGCCACCGGGTGATCCACTGAGCTTGCTGCATACCTTGCTGACGCAGGTAGATGCGCACGATCCG GCGCAGAGCGTTTCGCAGCAGTCCGGGTTGGGCAAGCGGCAGGAAAATGCATATGGCGTCGTTCAAGGCACCCTGCAAGG AGCCGCGCAATGA
Upstream 100 bases:
>100_bases TCAGCGATGCCGCGTTGGCAGCGTATTTCTCCGGCCCGGCGTTCACACCGTGGCAGCGCATGGGCAATATCGAAGGCTAT CGCGCGCCGCTGCCGCAACA
Downstream 100 bases:
>100_bases ACCGCTCAATGAACGCATCTGTAGTGCGCGTGGTGCTCATGCAGACGCGCAGTTGCGTCGATGCCAGAGCCCAGGGCCCG AAGCGTGCGTGCGCATACCG
Product: putative N-acetylglucosaminidase
Products: NA
Alternate protein names: Alpha-N-Acetylglucosaminidase Family Protein; N-Acetylglucosaminidase; LOW QUALITY PROTEIN Alpha-N-Acetylglucosaminidase; Glycoside Hydrolase Family
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MDRQQARAAEADPDAHARVGHAAGAAGICRLRAQGVRAGASACAHLPHARIYRMRAWEGFHETYWLDPRDPLFAKVARRF LELYTQAYGAGEFYLADAFNEMLPPVADDGSDVAAAKYGDSIANFDAARAKAVPPAQRDARLAAYGQALYRSIAQVNPKA TWVMQGWLFGADCAFWQPQAIAAFLGKVPDARLMVLDIGNDRYPGTWKASQAFDNKQWIYGYVHNYGASNPLYGDVAFYR QDLQALLADPGKRNLRGFGVFPEGLHSNSVVYEYLYALAWEGPQHPWSQWLAQYLRARYGRSDAALLSAWTDLGAGIYQT RYWSPRWWNTHAGAYLLFKRPTADIVNFDDRPGDPQRLRSAIDALLQQADRYADAPLYRYDLIEDARHYLSLQADRQLQT VVQAYNAGDFARGDAQLARTTQLVQGLDALVGGQHETLAAWTGQAAAAVGNDARLLRAYVGNARAQVSVWGGDGNLADYA SKAWQGMYADFYLQRWTRFLSAYRAARKAGTPFDAQTVDQQLATWERQWAAQDEVPKPRPPGDPLSLLHTLLTQVDAHDP AQSVSQQSGLGKRQENAYGVVQGTLQGAAQ
Sequences:
>Translated_590_residues MDRQQARAAEADPDAHARVGHAAGAAGICRLRAQGVRAGASACAHLPHARIYRMRAWEGFHETYWLDPRDPLFAKVARRF LELYTQAYGAGEFYLADAFNEMLPPVADDGSDVAAAKYGDSIANFDAARAKAVPPAQRDARLAAYGQALYRSIAQVNPKA TWVMQGWLFGADCAFWQPQAIAAFLGKVPDARLMVLDIGNDRYPGTWKASQAFDNKQWIYGYVHNYGASNPLYGDVAFYR QDLQALLADPGKRNLRGFGVFPEGLHSNSVVYEYLYALAWEGPQHPWSQWLAQYLRARYGRSDAALLSAWTDLGAGIYQT RYWSPRWWNTHAGAYLLFKRPTADIVNFDDRPGDPQRLRSAIDALLQQADRYADAPLYRYDLIEDARHYLSLQADRQLQT VVQAYNAGDFARGDAQLARTTQLVQGLDALVGGQHETLAAWTGQAAAAVGNDARLLRAYVGNARAQVSVWGGDGNLADYA SKAWQGMYADFYLQRWTRFLSAYRAARKAGTPFDAQTVDQQLATWERQWAAQDEVPKPRPPGDPLSLLHTLLTQVDAHDP AQSVSQQSGLGKRQENAYGVVQGTLQGAAQ >Mature_590_residues MDRQQARAAEADPDAHARVGHAAGAAGICRLRAQGVRAGASACAHLPHARIYRMRAWEGFHETYWLDPRDPLFAKVARRF LELYTQAYGAGEFYLADAFNEMLPPVADDGSDVAAAKYGDSIANFDAARAKAVPPAQRDARLAAYGQALYRSIAQVNPKA TWVMQGWLFGADCAFWQPQAIAAFLGKVPDARLMVLDIGNDRYPGTWKASQAFDNKQWIYGYVHNYGASNPLYGDVAFYR QDLQALLADPGKRNLRGFGVFPEGLHSNSVVYEYLYALAWEGPQHPWSQWLAQYLRARYGRSDAALLSAWTDLGAGIYQT RYWSPRWWNTHAGAYLLFKRPTADIVNFDDRPGDPQRLRSAIDALLQQADRYADAPLYRYDLIEDARHYLSLQADRQLQT VVQAYNAGDFARGDAQLARTTQLVQGLDALVGGQHETLAAWTGQAAAAVGNDARLLRAYVGNARAQVSVWGGDGNLADYA SKAWQGMYADFYLQRWTRFLSAYRAARKAGTPFDAQTVDQQLATWERQWAAQDEVPKPRPPGDPLSLLHTLLTQVDAHDP AQSVSQQSGLGKRQENAYGVVQGTLQGAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66346698, Length=523, Percent_Identity=27.3422562141491, Blast_Score=178, Evalue=2e-44, Organism=Caenorhabditis elegans, GI32564213, Length=463, Percent_Identity=25.2699784017279, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI21356587, Length=510, Percent_Identity=26.078431372549, Blast_Score=191, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65459; Mature: 65459
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRQQARAAEADPDAHARVGHAAGAAGICRLRAQGVRAGASACAHLPHARIYRMRAWEGF CCHHHHHCCCCCCCHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC HETYWLDPRDPLFAKVARRFLELYTQAYGAGEFYLADAFNEMLPPVADDGSDVAAAKYGD CCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHHCC SIANFDAARAKAVPPAQRDARLAAYGQALYRSIAQVNPKATWVMQGWLFGADCAFWQPQA HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCCCCHHH IAAFLGKVPDARLMVLDIGNDRYPGTWKASQAFDNKQWIYGYVHNYGASNPLYGDVAFYR HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHH QDLQALLADPGKRNLRGFGVFPEGLHSNSVVYEYLYALAWEGPQHPWSQWLAQYLRARYG HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC RSDAALLSAWTDLGAGIYQTRYWSPRWWNTHAGAYLLFKRPTADIVNFDDRPGDPQRLRS CCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCHHCCCCCCCCCHHHHHH AIDALLQQADRYADAPLYRYDLIEDARHYLSLQADRQLQTVVQAYNAGDFARGDAQLART HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHH TQLVQGLDALVGGQHETLAAWTGQAAAAVGNDARLLRAYVGNARAQVSVWGGDGNLADYA HHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHH SKAWQGMYADFYLQRWTRFLSAYRAARKAGTPFDAQTVDQQLATWERQWAAQDEVPKPRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PGDPLSLLHTLLTQVDAHDPAQSVSQQSGLGKRQENAYGVVQGTLQGAAQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCC >Mature Secondary Structure MDRQQARAAEADPDAHARVGHAAGAAGICRLRAQGVRAGASACAHLPHARIYRMRAWEGF CCHHHHHCCCCCCCHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC HETYWLDPRDPLFAKVARRFLELYTQAYGAGEFYLADAFNEMLPPVADDGSDVAAAKYGD CCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHHCC SIANFDAARAKAVPPAQRDARLAAYGQALYRSIAQVNPKATWVMQGWLFGADCAFWQPQA HHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCCCCHHH IAAFLGKVPDARLMVLDIGNDRYPGTWKASQAFDNKQWIYGYVHNYGASNPLYGDVAFYR HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHH QDLQALLADPGKRNLRGFGVFPEGLHSNSVVYEYLYALAWEGPQHPWSQWLAQYLRARYG HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC RSDAALLSAWTDLGAGIYQTRYWSPRWWNTHAGAYLLFKRPTADIVNFDDRPGDPQRLRS CCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCHHCCCCCCCCCHHHHHH AIDALLQQADRYADAPLYRYDLIEDARHYLSLQADRQLQTVVQAYNAGDFARGDAQLART HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHH TQLVQGLDALVGGQHETLAAWTGQAAAAVGNDARLLRAYVGNARAQVSVWGGDGNLADYA HHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHH SKAWQGMYADFYLQRWTRFLSAYRAARKAGTPFDAQTVDQQLATWERQWAAQDEVPKPRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PGDPLSLLHTLLTQVDAHDPAQSVSQQSGLGKRQENAYGVVQGTLQGAAQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA