Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is gluP [H]
Identifier: 84625355
GI number: 84625355
Start: 4177293
End: 4178570
Strand: Reverse
Name: gluP [H]
Synonym: XOO_3698
Alternate gene names: 84625355
Gene position: 4178570-4177293 (Counterclockwise)
Preceding gene: 84625356
Following gene: 84625354
Centisome position: 84.58
GC content: 61.82
Gene sequence:
>1278_bases ATGACTACCGCCAGGCCTGCAAATCCCGTTGTCTCGATCGCCATCGTCGGCGTACTGTTTTTCATCATCGGCTTTTTCAC CTGGATCAACGGGCCGCTGATCACCTTCGTGCGGCTGGCGTTCGATCTCAATGAGGTCAATGCGTTCCTGGTGCTGATGG TGTTCTACCTGTCGTACTTCTTTCTGGCGCTGCCCTCGTCGTGGATTCTCAAGCGCACCGGCATGAAGAAAGGCCTGGCG CTGAGCCTGGTGGTGATGGCCGTTGGTGCCGCAGGCTTCGGCCAGTTCGCCACGCAGCGCTGGTATCCGGGCGCGTTGGG CGGCTTGTTCGTGATCGGTAGCGGCCTGGCCTTGTTGCAGACTGCAATCAATCCGTACATCAGCATTCTCGGGCCGATCG AAAGTGCCGCGCGCCGCATCGCCTTGATGGGCATCTGCAACAAGATTGCCGGCATCCTGGCGCCGATCCTGATCGGCTCG CTGGTGCTGCACGGCATCGGCGATTTGTCTGCGCAGGTGGCCAGTGCCAATGCGGCGACCAAGGAAACCCTGCTGAGTGC GTTTGCTGCGCAAGTCCACGCACCGTACCTGGTGATGTCCGGGGTGCTGTTGCTGCTGGCCATCGGTGTGCTGTTCTCGC CGCTGCCGGAGCTCAAGGCCTCCGAAGCCAACGCCACCCCCAGCGCCAAGGCTGGCGTGCAGAAATCCAGCATCTTCCAG TTCCCGCATCTGTGGCTGGGTGTGCTGTGCTTGTTCGTCTATGTGGGCGTGGAAGTGATGGCCGGCGATGCCATCGGTAC CTACGGCCACGGCTTCAATCTGCCGCTGGACAGCACCAAGATCTTCACCTCCTACACCTTGGGCGCGATGTTGCTGGGCT ATATGGCCGGCCTGGTGCTGATTCCGCGTGTGATCTCGCAGGCGCGCTACCTGAGCGTGTCCGCGGTGCTGGGCGTGCTG TTCTCGCTTGGTGCCCTGTTCACCCACGGCTACGTGTCGGTGGGCTTCGTCGCCGCACTCGGCTTTGCCAACGCGATGAT GTGGCCGGCGATCTTCCCACTGGCCATTCGCGGGTTGGGCCGCTTCACCGAGATTGGGTCGGCATTGCTGGTGATGGGCA TCGCTGGCGGCGCGATCATTCCGCAGCTGTTCGCCATTCTCAAACAGCACTACGACTTCCAGGTCGTGTTCGCTGCGCTG ATGGTGCCTTGCTATCTGTACATCCTGTTCTATTCGCTGCGCGGTCACCGCGTGGGCCTGCCGGCCCAGGCCAAGTGA
Upstream 100 bases:
>100_bases CCGACACCTATTGCCACAACGATTTCTACGATTTCGTCGCCGAACTGCGCCGCTGACGCCGACGGCATTCCTTACGGTAA CCTATAGAGCCAGCTGATCC
Downstream 100 bases:
>100_bases TCGCGGCGGCATGATGCGTTCCGACGGACAAGGTACATCCATGCGCAGGCCTACCATCAAAGATGTCGCCGAACGCGCCA AGGTCTCGTTGAAGACCGTG
Product: glucose-galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTTARPANPVVSIAIVGVLFFIIGFFTWINGPLITFVRLAFDLNEVNAFLVLMVFYLSYFFLALPSSWILKRTGMKKGLA LSLVVMAVGAAGFGQFATQRWYPGALGGLFVIGSGLALLQTAINPYISILGPIESAARRIALMGICNKIAGILAPILIGS LVLHGIGDLSAQVASANAATKETLLSAFAAQVHAPYLVMSGVLLLLAIGVLFSPLPELKASEANATPSAKAGVQKSSIFQ FPHLWLGVLCLFVYVGVEVMAGDAIGTYGHGFNLPLDSTKIFTSYTLGAMLLGYMAGLVLIPRVISQARYLSVSAVLGVL FSLGALFTHGYVSVGFVAALGFANAMMWPAIFPLAIRGLGRFTEIGSALLVMGIAGGAIIPQLFAILKQHYDFQVVFAAL MVPCYLYILFYSLRGHRVGLPAQAK
Sequences:
>Translated_425_residues MTTARPANPVVSIAIVGVLFFIIGFFTWINGPLITFVRLAFDLNEVNAFLVLMVFYLSYFFLALPSSWILKRTGMKKGLA LSLVVMAVGAAGFGQFATQRWYPGALGGLFVIGSGLALLQTAINPYISILGPIESAARRIALMGICNKIAGILAPILIGS LVLHGIGDLSAQVASANAATKETLLSAFAAQVHAPYLVMSGVLLLLAIGVLFSPLPELKASEANATPSAKAGVQKSSIFQ FPHLWLGVLCLFVYVGVEVMAGDAIGTYGHGFNLPLDSTKIFTSYTLGAMLLGYMAGLVLIPRVISQARYLSVSAVLGVL FSLGALFTHGYVSVGFVAALGFANAMMWPAIFPLAIRGLGRFTEIGSALLVMGIAGGAIIPQLFAILKQHYDFQVVFAAL MVPCYLYILFYSLRGHRVGLPAQAK >Mature_424_residues TTARPANPVVSIAIVGVLFFIIGFFTWINGPLITFVRLAFDLNEVNAFLVLMVFYLSYFFLALPSSWILKRTGMKKGLAL SLVVMAVGAAGFGQFATQRWYPGALGGLFVIGSGLALLQTAINPYISILGPIESAARRIALMGICNKIAGILAPILIGSL VLHGIGDLSAQVASANAATKETLLSAFAAQVHAPYLVMSGVLLLLAIGVLFSPLPELKASEANATPSAKAGVQKSSIFQF PHLWLGVLCLFVYVGVEVMAGDAIGTYGHGFNLPLDSTKIFTSYTLGAMLLGYMAGLVLIPRVISQARYLSVSAVLGVLF SLGALFTHGYVSVGFVAALGFANAMMWPAIFPLAIRGLGRFTEIGSALLVMGIAGGAIIPQLFAILKQHYDFQVVFAALM VPCYLYILFYSLRGHRVGLPAQAK
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=381, Percent_Identity=28.3464566929134, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45092; Mature: 44960
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARPANPVVSIAIVGVLFFIIGFFTWINGPLITFVRLAFDLNEVNAFLVLMVFYLSYF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLALPSSWILKRTGMKKGLALSLVVMAVGAAGFGQFATQRWYPGALGGLFVIGSGLALLQ HHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCHHHHH TAINPYISILGPIESAARRIALMGICNKIAGILAPILIGSLVLHGIGDLSAQVASANAAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KETLLSAFAAQVHAPYLVMSGVLLLLAIGVLFSPLPELKASEANATPSAKAGVQKSSIFQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHC FPHLWLGVLCLFVYVGVEVMAGDAIGTYGHGFNLPLDSTKIFTSYTLGAMLLGYMAGLVL CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IPRVISQARYLSVSAVLGVLFSLGALFTHGYVSVGFVAALGFANAMMWPAIFPLAIRGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFTEIGSALLVMGIAGGAIIPQLFAILKQHYDFQVVFAALMVPCYLYILFYSLRGHRVGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC PAQAK CCCCC >Mature Secondary Structure TTARPANPVVSIAIVGVLFFIIGFFTWINGPLITFVRLAFDLNEVNAFLVLMVFYLSYF CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLALPSSWILKRTGMKKGLALSLVVMAVGAAGFGQFATQRWYPGALGGLFVIGSGLALLQ HHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHCCHHHHH TAINPYISILGPIESAARRIALMGICNKIAGILAPILIGSLVLHGIGDLSAQVASANAAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KETLLSAFAAQVHAPYLVMSGVLLLLAIGVLFSPLPELKASEANATPSAKAGVQKSSIFQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHC FPHLWLGVLCLFVYVGVEVMAGDAIGTYGHGFNLPLDSTKIFTSYTLGAMLLGYMAGLVL CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IPRVISQARYLSVSAVLGVLFSLGALFTHGYVSVGFVAALGFANAMMWPAIFPLAIRGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFTEIGSALLVMGIAGGAIIPQLFAILKQHYDFQVVFAALMVPCYLYILFYSLRGHRVGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC PAQAK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]