Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625346
Identifier: 84625346
GI number: 84625346
Start: 4163661
End: 4165118
Strand: Reverse
Name: 84625346
Synonym: XOO_3689
Alternate gene names: NA
Gene position: 4165118-4163661 (Counterclockwise)
Preceding gene: 84625352
Following gene: 84625345
Centisome position: 84.31
GC content: 61.45
Gene sequence:
>1458_bases ATGCTGTTTTCCCGTTTGTTTGCGTTGTCTGTTGAATCAATCCGCACAGCCACTGCGCAGCCGATCCAGGCGCATGATCG TCCCTGCGCAACGTCCCCGGTCGCACGTAGACGGTGTTTTCCAAGCGCCGTTGTAGCCAACCCCCTGCAGGCGCGTGGCG TTGCTTCGGGCAATGCGACCCATAGGCAGTCGCCACTACGCGCGCCATGGAGCGCGGCGGTCCGCGGCTTGCTGATCGGT GGCGTAGGGGTTGGTGGCGCGATGGCGCTGCCGGCGTCTGAACAGCAACCGCCCGTACCAGCGCCATCACAACCGCAATC CGCACCCGCATCTGTGCAGGAACCGGCGCCGGCCAGTCCCTGGGTGTCCACACTGGACGGAATCAAGGTGGTGGGCTATC AGGCCAGCCTGGGCAAGGCGCTCAACGTCAAGCGCAATGCCGATGCGATCATCGACGCGATCAGCGCCGAAGACATCGGC AAATTCCCCGACACCAATGTTGCCGAGTCGCTGTCGCGCTTGTCCGGCATCACCGTCGACAGGCAATTCGGCGAAGGCGA GAAAGTCAGCATTCTCGGCACCGACCCGGCGCTCAATCGCGTGCTGCTCAATGGTCAGGCCATTGCATCGACCAGCTGGG GCGGCGACCCCAACGACCCGGACAGCAGCTCGTTCAACTACAGCACGCTGGCGCCGGAAGTGGTGGGGCTGATGGAGGTC TACAAGACGCCGGAAGCGCGGATCGACGAAGGGTCCATCGGCGGCACGGTGATCGTAAATACGCGCAAACCGCTCGACCT GGAGCGCAACACGTTCACCGGCACGGTAACTTATGGCTACAATGATCGTCCCGACGAAGGCAAGCCGAACGCGTCGGTGC TGTATAGCTGGAAGAATCAGGACGAAACGCTGGGCGTGCTCACCTCGGTGATGCATTCGCAGCGTCTACTGCGCCGCGAT GGCGTGGAAATCTTTGGCTACGACAATGTCGCGGGCGCAGCGTTTCCACCTGCAGTGGTGGGAAACAACACCGGTGTGTT TCCCACCTCGATCAACACCGCGTTGTTCCAGCAGACGCGCAAGCGCGATGGATGCAGCGCAGCGCTGCAATGGAAACCCG ATAGCGAGTTCGAGCTCAACCTGACTGGTCCGTACGTCAAGGAGAGTTTCGACAATTACAACCAGAGCCGTTATGGCTAT TGGGGCTCCAATCCCGGCGACGCGCAAGCATTGGGCTTTGAAAATGGCGTCGCCACCTCAGGCACGTTCGGCGATCAATC CAACACCTATCTCGACGGCTACCTGCGCAACAGCGAGGTCACCACCGGCAGCATCCACCTGCGCACCGACTGGCATGGCG ATGGTTGGAACGCCTCCAGCCAGGTCGGTTACACCAGTTCGCAAGGCGGTGCCGAGCGCATCTACGGCATCCAGATTCCG CAATCTGGCTGGCTATAA
Upstream 100 bases:
>100_bases GGTTCGGCTCAGGGGACGGATCGTGGCCTTGCGCGTGCATCGCGCGTCCTGGTGCAACTGAAGGATTGCGACCTGACGTC TCAGCCGCGAGGTCAACACA
Downstream 100 bases:
>100_bases CTACAACATCGACGGGCGCCGGACCGCGATGGACTACAGCACCGATCCCACCAATGCGGCAGCGATGCAGCTCAACAACG CCTCGGCCAGCCATAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; Outer Membrane Protein; NB-Dependent Receptor-Like Protein; NB Dependent Receptor-Related Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB Dependent Receptor; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Plug Domain; 3-Dehydroquinate Synthase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLFSRLFALSVESIRTATAQPIQAHDRPCATSPVARRRCFPSAVVANPLQARGVASGNATHRQSPLRAPWSAAVRGLLIG GVGVGGAMALPASEQQPPVPAPSQPQSAPASVQEPAPASPWVSTLDGIKVVGYQASLGKALNVKRNADAIIDAISAEDIG KFPDTNVAESLSRLSGITVDRQFGEGEKVSILGTDPALNRVLLNGQAIASTSWGGDPNDPDSSSFNYSTLAPEVVGLMEV YKTPEARIDEGSIGGTVIVNTRKPLDLERNTFTGTVTYGYNDRPDEGKPNASVLYSWKNQDETLGVLTSVMHSQRLLRRD GVEIFGYDNVAGAAFPPAVVGNNTGVFPTSINTALFQQTRKRDGCSAALQWKPDSEFELNLTGPYVKESFDNYNQSRYGY WGSNPGDAQALGFENGVATSGTFGDQSNTYLDGYLRNSEVTTGSIHLRTDWHGDGWNASSQVGYTSSQGGAERIYGIQIP QSGWL
Sequences:
>Translated_485_residues MLFSRLFALSVESIRTATAQPIQAHDRPCATSPVARRRCFPSAVVANPLQARGVASGNATHRQSPLRAPWSAAVRGLLIG GVGVGGAMALPASEQQPPVPAPSQPQSAPASVQEPAPASPWVSTLDGIKVVGYQASLGKALNVKRNADAIIDAISAEDIG KFPDTNVAESLSRLSGITVDRQFGEGEKVSILGTDPALNRVLLNGQAIASTSWGGDPNDPDSSSFNYSTLAPEVVGLMEV YKTPEARIDEGSIGGTVIVNTRKPLDLERNTFTGTVTYGYNDRPDEGKPNASVLYSWKNQDETLGVLTSVMHSQRLLRRD GVEIFGYDNVAGAAFPPAVVGNNTGVFPTSINTALFQQTRKRDGCSAALQWKPDSEFELNLTGPYVKESFDNYNQSRYGY WGSNPGDAQALGFENGVATSGTFGDQSNTYLDGYLRNSEVTTGSIHLRTDWHGDGWNASSQVGYTSSQGGAERIYGIQIP QSGWL >Mature_485_residues MLFSRLFALSVESIRTATAQPIQAHDRPCATSPVARRRCFPSAVVANPLQARGVASGNATHRQSPLRAPWSAAVRGLLIG GVGVGGAMALPASEQQPPVPAPSQPQSAPASVQEPAPASPWVSTLDGIKVVGYQASLGKALNVKRNADAIIDAISAEDIG KFPDTNVAESLSRLSGITVDRQFGEGEKVSILGTDPALNRVLLNGQAIASTSWGGDPNDPDSSSFNYSTLAPEVVGLMEV YKTPEARIDEGSIGGTVIVNTRKPLDLERNTFTGTVTYGYNDRPDEGKPNASVLYSWKNQDETLGVLTSVMHSQRLLRRD GVEIFGYDNVAGAAFPPAVVGNNTGVFPTSINTALFQQTRKRDGCSAALQWKPDSEFELNLTGPYVKESFDNYNQSRYGY WGSNPGDAQALGFENGVATSGTFGDQSNTYLDGYLRNSEVTTGSIHLRTDWHGDGWNASSQVGYTSSQGGAERIYGIQIP QSGWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51701; Mature: 51701
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSRLFALSVESIRTATAQPIQAHDRPCATSPVARRRCFPSAVVANPLQARGVASGNAT CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHCCCHHHHCCCHHHCCCCCCCCC HRQSPLRAPWSAAVRGLLIGGVGVGGAMALPASEQQPPVPAPSQPQSAPASVQEPAPASP CCCCCCCCCHHHHHHEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WVSTLDGIKVVGYQASLGKALNVKRNADAIIDAISAEDIGKFPDTNVAESLSRLSGITVD HHHHHCCEEEEEEHHHCCCCCCCCCCCHHHHHHHCHHHCCCCCCCHHHHHHHHHHCCEEE RQFGEGEKVSILGTDPALNRVLLNGQAIASTSWGGDPNDPDSSSFNYSTLAPEVVGLMEV CCCCCCCEEEEEECCHHHCEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH YKTPEARIDEGSIGGTVIVNTRKPLDLERNTFTGTVTYGYNDRPDEGKPNASVLYSWKNQ HCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCC DETLGVLTSVMHSQRLLRRDGVEIFGYDNVAGAAFPPAVVGNNTGVFPTSINTALFQQTR CHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHH KRDGCSAALQWKPDSEFELNLTGPYVKESFDNYNQSRYGYWGSNPGDAQALGFENGVATS CCCCCCEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCC GTFGDQSNTYLDGYLRNSEVTTGSIHLRTDWHGDGWNASSQVGYTSSQGGAERIYGIQIP CCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECC QSGWL CCCCC >Mature Secondary Structure MLFSRLFALSVESIRTATAQPIQAHDRPCATSPVARRRCFPSAVVANPLQARGVASGNAT CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHCCCHHHHCCCHHHCCCCCCCCC HRQSPLRAPWSAAVRGLLIGGVGVGGAMALPASEQQPPVPAPSQPQSAPASVQEPAPASP CCCCCCCCCHHHHHHEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WVSTLDGIKVVGYQASLGKALNVKRNADAIIDAISAEDIGKFPDTNVAESLSRLSGITVD HHHHHCCEEEEEEHHHCCCCCCCCCCCHHHHHHHCHHHCCCCCCCHHHHHHHHHHCCEEE RQFGEGEKVSILGTDPALNRVLLNGQAIASTSWGGDPNDPDSSSFNYSTLAPEVVGLMEV CCCCCCCEEEEEECCHHHCEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH YKTPEARIDEGSIGGTVIVNTRKPLDLERNTFTGTVTYGYNDRPDEGKPNASVLYSWKNQ HCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCC DETLGVLTSVMHSQRLLRRDGVEIFGYDNVAGAAFPPAVVGNNTGVFPTSINTALFQQTR CHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHH KRDGCSAALQWKPDSEFELNLTGPYVKESFDNYNQSRYGYWGSNPGDAQALGFENGVATS CCCCCCEEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCC GTFGDQSNTYLDGYLRNSEVTTGSIHLRTDWHGDGWNASSQVGYTSSQGGAERIYGIQIP CCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECC QSGWL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA