Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is insI1 [C]
Identifier: 84625340
GI number: 84625340
Start: 4158847
End: 4159260
Strand: Reverse
Name: insI1 [C]
Synonym: XOO_3683
Alternate gene names: 84625340
Gene position: 4159260-4158847 (Counterclockwise)
Preceding gene: 84625341
Following gene: 84625339
Centisome position: 84.19
GC content: 58.94
Gene sequence:
>414_bases ATGACCGAACGCCGCAGTCGTCTGCATCTGCTGGCTTACTCCCCCGACGGCACCGCCGAGAACGTGCGCAACGCCATTGT CCAGCGACTGGGCGGCCTGCGCCATACAGTTCACACGCTCACCGCCGACAACGGCAAGGAGTTCGCCGATCATCGGCTCA TTGCCGCCTGCTTGCAGAGCGATTTCTATTTCGCAGATCCGTACTGCGCATGGCAGCGCGGCAGCAACGAGAATGCCAAC GGGTTGACACGCCAATACTTGCCACGACAGACCGATTTCAGCACCATCACCAATGCGCACCTGCGATGGATCGAGCAGCG GCTCTACAATCGTCCGCGCAAGATACTTGGATTCAAAACGCCCCTCGAAGTCTTCTCCGAGGAGGTCCTCAACAGCGTTG CGAATCAGAGTTGA
Upstream 100 bases:
>100_bases TGGACACAGCGCCCCAGTGTGGTTGAGCAGCGAAGCCGTATCGGCGACTGGGAGCTGGAGACCATCAGGGCCTCGCACCG GAAAGGGTTTGGTGTTCAGC
Downstream 100 bases:
>100_bases ATTCGCCGACCTTCCCTAGCTCGCTGCAATAACGCCATTATCAGCGCTCTCATACCCCTGTCGTCTCTATTACACATCGG GATACCTGATTAGCCCCGAC
Product: IS1112 transposase
Products: NA
Alternate protein names: Transposon TN4551 [H]
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQSDFYFADPYCAWQRGSNENAN GLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVANQS
Sequences:
>Translated_137_residues MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQSDFYFADPYCAWQRGSNENAN GLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVANQS >Mature_136_residues TERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQSDFYFADPYCAWQRGSNENANG LTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVANQS
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1786450, Length=130, Percent_Identity=36.1538461538462, Blast_Score=86, Evalue=8e-19, Organism=Escherichia coli, GI1790736, Length=130, Percent_Identity=36.1538461538462, Blast_Score=85, Evalue=1e-18, Organism=Escherichia coli, GI1787671, Length=130, Percent_Identity=36.1538461538462, Blast_Score=85, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 15749; Mature: 15618
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQS CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHC DFYFADPYCAWQRGSNENANGLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKT CCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC PLEVFSEEVLNSVANQS HHHHHHHHHHHHHHCCC >Mature Secondary Structure TERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHTVHTLTADNGKEFADHRLIAACLQS CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHC DFYFADPYCAWQRGSNENANGLTRQYLPRQTDFSTITNAHLRWIEQRLYNRPRKILGFKT CCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC PLEVFSEEVLNSVANQS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2820936 [H]