Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625339
Identifier: 84625339
GI number: 84625339
Start: 4157709
End: 4158671
Strand: Reverse
Name: 84625339
Synonym: XOO_3682
Alternate gene names: NA
Gene position: 4158671-4157709 (Counterclockwise)
Preceding gene: 84625340
Following gene: 84625336
Centisome position: 84.18
GC content: 65.11
Gene sequence:
>963_bases ATGAGCATCAACACTTTGCAGTTCCAGGCTGGATTGTCGATGCCTGAGTTCTTTGCGTCCTACGGCACCGAGGCCAAGTG CTACCGCGCTCTGTACAGATGGCGGTGGCCCCAGGGATTTCGCTGTCCGTGCTGCGCGGGACGAGCGCGCTCGCGCTTCA AGCGCGGTGGCGTCATCTACTACCCGTGCAGCACGTGCCGGCACCAGACCAGCCGGATCGCAGGCACGATGTTCCAGGGC ACCCAGCTGCCACTGCGCACCTGGATGCTGGCGCTGCACCTGTTGACCTCGACCACGACCAACATGGCTGCGCTGGAGCT GATGCGTCACCTGGGCGTCAACTACAGGACCGCCTGGCGGATGAAGCACAAGATCATGCAGGTCATGGCCGAGCGCGAAG CCACGCGTCGACTGTCCGGGTTCGTGCAGATCGACGATGCCTACCTGGGCGGGGAGCGCAACGGCGGCAAGGCTGGGCGC GGATCGCAGAACAAGCAACCGTTCCTGATTGCGGTGCAGACCGATGCCAGCCTCACGGCGCCGAGCTTTGTGGTGATCGA GCCGGTGCGCAGCTTCGAAAATGCCGCGCTCACGGACTGGATCGCCCGTCGCCTGAGGCCAGAATGCGATGCCTACACCG ACGGGTTGGCCTGTTTCGGCCGCCTGGAAGACGCCGGCCATGCACACACCACACTGGACACCGGCGGCGGACGCGCAGCC ACAGAGGCCGCCGGCGCCCGCTGGGTCAACGTGGTGCTTGGCAATCTCACGCGCGCCATCAGCGGCGTCTATCACGCCAT CGCGCAAGGCAAATATGCACGACGGTATCTGGCCGAGGCCGCCTACCGCTTCAACCGCCGCTTCCGGCTGTGCGAGATGC TGCCACGATTGGCCACGGCGATGATGCGTTGCAAGCCCTGCCCGGAGCCGGTCCTGCGTGCTGCCAGCAATTTCCATGGC TGA
Upstream 100 bases:
>100_bases ATCGGGATACCTGATTAGCCCCGACCTTCAGCCAGCAGTCGCAGGATCTGCGCCAGGCGGGGTTGATGGTGCCGTCACCT GAAGTCAACGAGGTGGCGAG
Downstream 100 bases:
>100_bases GGGTCAGGGCTAATCAGGTCGGGATATGCCACGCGTTGTTTATGCGCTGGTCTTTCGTGCTGCCGTAATCGCTGCAATAC GCGCCTTGGTCAGTGCCTCG
Product: ISXo2 transposase
Products: NA
Alternate protein names: ISSpo8 Transposase; ISSpo3 Transposase; ISXo2 Transposase; ISXo2 Transposase; ISSod11 Transposase; Outer Membrane Efflux Protein; ISXo5 Transposase
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSINTLQFQAGLSMPEFFASYGTEAKCYRALYRWRWPQGFRCPCCAGRARSRFKRGGVIYYPCSTCRHQTSRIAGTMFQG TQLPLRTWMLALHLLTSTTTNMAALELMRHLGVNYRTAWRMKHKIMQVMAEREATRRLSGFVQIDDAYLGGERNGGKAGR GSQNKQPFLIAVQTDASLTAPSFVVIEPVRSFENAALTDWIARRLRPECDAYTDGLACFGRLEDAGHAHTTLDTGGGRAA TEAAGARWVNVVLGNLTRAISGVYHAIAQGKYARRYLAEAAYRFNRRFRLCEMLPRLATAMMRCKPCPEPVLRAASNFHG
Sequences:
>Translated_320_residues MSINTLQFQAGLSMPEFFASYGTEAKCYRALYRWRWPQGFRCPCCAGRARSRFKRGGVIYYPCSTCRHQTSRIAGTMFQG TQLPLRTWMLALHLLTSTTTNMAALELMRHLGVNYRTAWRMKHKIMQVMAEREATRRLSGFVQIDDAYLGGERNGGKAGR GSQNKQPFLIAVQTDASLTAPSFVVIEPVRSFENAALTDWIARRLRPECDAYTDGLACFGRLEDAGHAHTTLDTGGGRAA TEAAGARWVNVVLGNLTRAISGVYHAIAQGKYARRYLAEAAYRFNRRFRLCEMLPRLATAMMRCKPCPEPVLRAASNFHG >Mature_319_residues SINTLQFQAGLSMPEFFASYGTEAKCYRALYRWRWPQGFRCPCCAGRARSRFKRGGVIYYPCSTCRHQTSRIAGTMFQGT QLPLRTWMLALHLLTSTTTNMAALELMRHLGVNYRTAWRMKHKIMQVMAEREATRRLSGFVQIDDAYLGGERNGGKAGRG SQNKQPFLIAVQTDASLTAPSFVVIEPVRSFENAALTDWIARRLRPECDAYTDGLACFGRLEDAGHAHTTLDTGGGRAAT EAAGARWVNVVLGNLTRAISGVYHAIAQGKYARRYLAEAAYRFNRRFRLCEMLPRLATAMMRCKPCPEPVLRAASNFHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35866; Mature: 35735
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINTLQFQAGLSMPEFFASYGTEAKCYRALYRWRWPQGFRCPCCAGRARSRFKRGGVIY CCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEE YPCSTCRHQTSRIAGTMFQGTQLPLRTWMLALHLLTSTTTNMAALELMRHLGVNYRTAWR ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH MKHKIMQVMAEREATRRLSGFVQIDDAYLGGERNGGKAGRGSQNKQPFLIAVQTDASLTA HHHHHHHHHHHHHHHHHHHCCEEEECCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCC PSFVVIEPVRSFENAALTDWIARRLRPECDAYTDGLACFGRLEDAGHAHTTLDTGGGRAA CCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCHH TEAAGARWVNVVLGNLTRAISGVYHAIAQGKYARRYLAEAAYRFNRRFRLCEMLPRLATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMRCKPCPEPVLRAASNFHG HHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure SINTLQFQAGLSMPEFFASYGTEAKCYRALYRWRWPQGFRCPCCAGRARSRFKRGGVIY CCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEE YPCSTCRHQTSRIAGTMFQGTQLPLRTWMLALHLLTSTTTNMAALELMRHLGVNYRTAWR ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH MKHKIMQVMAEREATRRLSGFVQIDDAYLGGERNGGKAGRGSQNKQPFLIAVQTDASLTA HHHHHHHHHHHHHHHHHHHCCEEEECCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCC PSFVVIEPVRSFENAALTDWIARRLRPECDAYTDGLACFGRLEDAGHAHTTLDTGGGRAA CCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCHH TEAAGARWVNVVLGNLTRAISGVYHAIAQGKYARRYLAEAAYRFNRRFRLCEMLPRLATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMRCKPCPEPVLRAASNFHG HHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA