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The map label for this gene is insC1 [C]

Identifier: 84625327

GI number: 84625327

Start: 4144873

End: 4145136

Strand: Reverse

Name: insC1 [C]

Synonym: XOO_3670

Alternate gene names: 84625327

Gene position: 4145136-4144873 (Counterclockwise)

Preceding gene: 84625333

Following gene: 84625326

Centisome position: 83.91

GC content: 59.09

Gene sequence:

>264_bases
GTGAAGAAGCGTTTTTCCGAAGAGCAGATCATCGGCTTCCTGCGCGAAGCCGAGGCCGGCATGCCGATCAAAGACCTGTG
CCGACGGCATGGCTTCAGTGAGGCGTCCTACTACCTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGC
GGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGAAGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAG
GATGCGCTGCAAAAACAATGGTGA

Upstream 100 bases:

>100_bases
TCTCCGAAGGTCAGTTGCATCGTCGTCGTCCTGTTGCGTCTGTGCGATTGTCGCAGGATCGACGTCCCCCCAAGTTTGAG
TAGCACCTCAGTTTTTGGAC

Downstream 100 bases:

>100_bases
GCGCACCGGCGCGTCGTACGCTGGTGCGCGAGTGGATCGCAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCGGCGATCGGC
ATGAGCGCCAGTGCGCTGCG

Product: ISXoo3 transposase orfA

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIK
DALQKQW

Sequences:

>Translated_87_residues
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIK
DALQKQW
>Mature_87_residues
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIK
DALQKQW

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10235; Mature: 10235

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
ENTRLKKLLAEQVFQNDLIKDALQKQW
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
ENTRLKKLLAEQVFQNDLIKDALQKQW
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]