Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625238
Identifier: 84625238
GI number: 84625238
Start: 4051542
End: 4052474
Strand: Reverse
Name: 84625238
Synonym: XOO_3581
Alternate gene names: NA
Gene position: 4052474-4051542 (Counterclockwise)
Preceding gene: 84625239
Following gene: 84625237
Centisome position: 82.03
GC content: 65.49
Gene sequence:
>933_bases GTGGGCATGCCCTCCAAGCAGCGCGAATATTCCAATCGCTTTTTCGACTCGACAGTCTGGAACGACTTCGCCTTTCGCGA CGACGATGTCGTCATCGCCAGCTATGCCAAGGCAGGGACGACCTGGGTGCAGCAGATCGTCGCGCAACTGATCTTCGGCG GCGCCGAGGAGATCGAGGTCTCGCGGCTGTCGCCCTGGTTCGACTCGGTGTATCCGGACAAGGCCACCAAACAGCGGCTG CTCGCCGAGCAACGCCATCGCCGCTTCGTGAAAACCCATCTGCCCGCCGATGCGCTGGTGCTATCCGAACGCGCCCGCTA TCTCTACGTCGGCCGCGATGCGCGCGACATCGTCTGGAGCCTGTACGACCATCAGCGGGCAGTCAGCGCGGATGCGCAGG CGCGTCTGGATGCGGAGCCGTCCAGTAACGGTAAATTGAGGGTGATGCCGCCGCCCACGTGCTCGGTCGAGGACTATTTC CAGACCTGGATGCGTGCGGACGGTGCGCCGCTGTGGCCGTTCTGGGAGGGCGTGCGTTCCTGGTGGGCGCTGCGCGATTA CGACAACGTGCTGCTGGTGCATTACGCCGCGTTGCTGCATGACCTGCCTGCGCAAGTGCGGCGCATTGCCGCATTCCTGG ATATCCCGCTGGATGCCCCGTGCTGCGAGCGCGTGCTGGCGCACTGCAGTCTGGACTACATGCGCGCGCATGCGGCGCGC TACGTTCCACAGGGCGCCGGTTTCTGGCGCGACGGCGGCCGAGCCTTCTTCAATCAAGGTCTCAATGGACGGTGGCGCGA CCGACTGGCACCGGCAGTCGATGCGGCCTATCGGCAGCATGTTGTCGCCGAGCTGGGCGCCGAGTGCGCGCGTTGGCTCG CCACCGGCGATGTTGCGTCGGCGGCGCATGCGACGACCGGGAGGGTTGCTTAG
Upstream 100 bases:
>100_bases GGACTTGGAGCCAGGCGCGGATGCGGATCATGCGGTTGCGAAGTGTTCACGCGTGCATATCCGATGAGCCCGATGCGATG ACAACCGACAGGACGCCGAT
Downstream 100 bases:
>100_bases GGTGGCCAGCGACTCTTTCGCGGAGAACGGTATGGGTGGATCGTCGGCGCACGCCTACGATCAGGTGTCGCAGTACTACG ATCGCCTGAGGGACCACTAC
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MGMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEVSRLSPWFDSVYPDKATKQRL LAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWSLYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYF QTWMRADGAPLWPFWEGVRSWWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR YVPQGAGFWRDGGRAFFNQGLNGRWRDRLAPAVDAAYRQHVVAELGAECARWLATGDVASAAHATTGRVA
Sequences:
>Translated_310_residues MGMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEVSRLSPWFDSVYPDKATKQRL LAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWSLYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYF QTWMRADGAPLWPFWEGVRSWWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR YVPQGAGFWRDGGRAFFNQGLNGRWRDRLAPAVDAAYRQHVVAELGAECARWLATGDVASAAHATTGRVA >Mature_309_residues GMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEVSRLSPWFDSVYPDKATKQRLL AEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWSLYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYFQ TWMRADGAPLWPFWEGVRSWWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAARY VPQGAGFWRDGGRAFFNQGLNGRWRDRLAPAVDAAYRQHVVAELGAECARWLATGDVASAAHATTGRVA
Specific function: Involved in the synthesis of cell wall sulfolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfotransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI31563388, Length=268, Percent_Identity=25, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI31563386, Length=268, Percent_Identity=25, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI28830308, Length=273, Percent_Identity=27.1062271062271, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI4885617, Length=279, Percent_Identity=23.2974910394265, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4507305, Length=272, Percent_Identity=23.8970588235294, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI56847626, Length=268, Percent_Identity=22.0149253731343, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI29550928, Length=266, Percent_Identity=23.3082706766917, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI29540539, Length=265, Percent_Identity=22.6415094339623, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI29540537, Length=265, Percent_Identity=22.6415094339623, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI29540535, Length=265, Percent_Identity=22.6415094339623, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI29540531, Length=265, Percent_Identity=22.6415094339623, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI29540545, Length=285, Percent_Identity=23.859649122807, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI29550893, Length=265, Percent_Identity=23.0188679245283, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI4507303, Length=265, Percent_Identity=23.0188679245283, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI29550921, Length=253, Percent_Identity=22.5296442687747, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI10835035, Length=253, Percent_Identity=22.5296442687747, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI62868225, Length=253, Percent_Identity=22.5296442687747, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI62868223, Length=253, Percent_Identity=22.5296442687747, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI221468277, Length=266, Percent_Identity=24.4360902255639, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 [H]
Pfam domain/function: PF00685 Sulfotransfer_1 [H]
EC number: NA
Molecular weight: Translated: 35160; Mature: 35029
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEV CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHEEH SRLSPWFDSVYPDKATKQRLLAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWS HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCHHHHHHH LYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYFQTWMRADGAPLWPFWEGVRS HHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH WWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YVPQGAGFWRDGGRAFFNQGLNGRWRDRLAPAVDAAYRQHVVAELGAECARWLATGDVAS HCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAHATTGRVA HHHCCCCCCC >Mature Secondary Structure GMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEV CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHEEH SRLSPWFDSVYPDKATKQRLLAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWS HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCHHHHHHH LYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYFQTWMRADGAPLWPFWEGVRS HHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH WWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YVPQGAGFWRDGGRAFFNQGLNGRWRDRLAPAVDAAYRQHVVAELGAECARWLATGDVAS HCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAHATTGRVA HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA