Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84625239

Identifier: 84625239

GI number: 84625239

Start: 4052965

End: 4053669

Strand: Reverse

Name: 84625239

Synonym: XOO_3582

Alternate gene names: NA

Gene position: 4053669-4052965 (Counterclockwise)

Preceding gene: 84625240

Following gene: 84625238

Centisome position: 82.05

GC content: 60.28

Gene sequence:

>705_bases
ATGGATCAGAGAATCGCCATGTCGTTACAAGTGCTTGGTGCTGGCCTAGGCAGAACCGGGACGCTGTCGCTGAAGTTCGC
GCTGGAACATTTGGGATTTGGACCCTGTTATCACGCCACCGAGGTCGCCGCGAACATGCGTACGGCACTGCCGCTGTGGA
ATGCCGCCGAACGCGGTGCTGCAGACTGGTCGGCCATCTTCGCCGGCTACCGTTCGAGTACCGACCATCCTGGTTGCTAT
TACTGGCGGCAATTGATTGAGGTATATCCGCAGGCCAAGGTCGTCCTGACAGTGCGCGATCCCGACAGCTGGTTCGAGTC
GGTGACCCAGACCATCCTGATGCCGGGCAGAAAGAGCACCTTCGTCGGCCCCGAAGGCGAGACATTCAGTACTTTCTTGA
AACAACAGATGGGTGGGCGCAGTCAGGACCGCGCCTTCATGGTGGACTACTTCAACCGCTGGAATCAGGCAGTGATCGAT
ACGGTGCCAGCCGATCGGCTGCTGGTATTTTCGGCTCGGCAAGGCTGGGCGCCGCTATGCAGCTTCCTCGGCGTACCGGT
GCCGCACAAGCCCTACCCACACTTGCACGCACGGCCGCGGCTGCGTTGGTTTACGCGCGGCTTGCGTCTGCCGGACGACG
TTGCCGCACGCGAGCGACATGTGCGCGAATATCTGGAGTACCTGCGCGAAGATCTGTTCGGATAA

Upstream 100 bases:

>100_bases
AATTAAATTGCGCGTGGCATGTGTAGTTGCCGCATCCATCCTGACTGCCCGTGCTGGGACGTACGCCATCGCTGCGTGCT
ACGTTGCCGCCCTGCGTGTA

Downstream 100 bases:

>100_bases
ACGCACATTGCGTGGCTTATTCTGCGACACATGCCCGGCAATTTACTTTAAAAATAAAGTAATAGCCATACTGTTGATTG
GCCATATGACTATTGCTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDQRIAMSLQVLGAGLGRTGTLSLKFALEHLGFGPCYHATEVAANMRTALPLWNAAERGAADWSAIFAGYRSSTDHPGCY
YWRQLIEVYPQAKVVLTVRDPDSWFESVTQTILMPGRKSTFVGPEGETFSTFLKQQMGGRSQDRAFMVDYFNRWNQAVID
TVPADRLLVFSARQGWAPLCSFLGVPVPHKPYPHLHARPRLRWFTRGLRLPDDVAARERHVREYLEYLREDLFG

Sequences:

>Translated_234_residues
MDQRIAMSLQVLGAGLGRTGTLSLKFALEHLGFGPCYHATEVAANMRTALPLWNAAERGAADWSAIFAGYRSSTDHPGCY
YWRQLIEVYPQAKVVLTVRDPDSWFESVTQTILMPGRKSTFVGPEGETFSTFLKQQMGGRSQDRAFMVDYFNRWNQAVID
TVPADRLLVFSARQGWAPLCSFLGVPVPHKPYPHLHARPRLRWFTRGLRLPDDVAARERHVREYLEYLREDLFG
>Mature_234_residues
MDQRIAMSLQVLGAGLGRTGTLSLKFALEHLGFGPCYHATEVAANMRTALPLWNAAERGAADWSAIFAGYRSSTDHPGCY
YWRQLIEVYPQAKVVLTVRDPDSWFESVTQTILMPGRKSTFVGPEGETFSTFLKQQMGGRSQDRAFMVDYFNRWNQAVID
TVPADRLLVFSARQGWAPLCSFLGVPVPHKPYPHLHARPRLRWFTRGLRLPDDVAARERHVREYLEYLREDLFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26651; Mature: 26651

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRIAMSLQVLGAGLGRTGTLSLKFALEHLGFGPCYHATEVAANMRTALPLWNAAERGA
CCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHCCC
ADWSAIFAGYRSSTDHPGCYYWRQLIEVYPQAKVVLTVRDPDSWFESVTQTILMPGRKST
CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCC
FVGPEGETFSTFLKQQMGGRSQDRAFMVDYFNRWNQAVIDTVPADRLLVFSARQGWAPLC
CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
SFLGVPVPHKPYPHLHARPRLRWFTRGLRLPDDVAARERHVREYLEYLREDLFG
HHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQRIAMSLQVLGAGLGRTGTLSLKFALEHLGFGPCYHATEVAANMRTALPLWNAAERGA
CCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHCCC
ADWSAIFAGYRSSTDHPGCYYWRQLIEVYPQAKVVLTVRDPDSWFESVTQTILMPGRKST
CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCC
FVGPEGETFSTFLKQQMGGRSQDRAFMVDYFNRWNQAVIDTVPADRLLVFSARQGWAPLC
CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
SFLGVPVPHKPYPHLHARPRLRWFTRGLRLPDDVAARERHVREYLEYLREDLFG
HHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA