Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622629
Identifier: 84622629
GI number: 84622629
Start: 1061466
End: 1063346
Strand: Direct
Name: 84622629
Synonym: XOO_0972
Alternate gene names: NA
Gene position: 1061466-1063346 (Clockwise)
Preceding gene: 84622624
Following gene: 84622630
Centisome position: 21.49
GC content: 65.6
Gene sequence:
>1881_bases GTGCACAGGGCAATGCAGGGGGACCAACGCGCACATCGCACCTTCGTGATCCTGTGGACACTGGCCACGGCCGTCAAGCT ATTGATCGCCGCACGCTTGCCGCTGTTCGTGGACGAGGCGTTCTACTGGCAGGAAGGCCAGCATCTGGCCGCAGCGTATT CGGACCTGCCGGGCATGACCGCTTGGCTGGCACGTCTGGGTGTCGAGCTCGGTGGACATCACCTTCTGGCGTTGCGACTA CCGTTTCTGGCCATTTCCGCGCTGATTCCCTGGTTGATCGCGCATATCGCCACGCGCTGGTTCGGCTCCACGCTGGGCTG GCAGGCCGGCAGCCTGACCTTGCTGATGCCGCTATCGGCCACGCTGGGCATTCTGGCTGTGCCGGATGTGCCGATGGCCT TGGCGGCGGTGCTGTGCATGGATGCCGGTGCGCGCTTGCTGCGCGAGGTCGATGCCACCAGTGCGCTGGAGCTCGCCATC GGCTTGGTCATCGGTGCGCTCAGCCACTATCGCTTCGTCGGCGTGATCGGGGTGGGCTGCATCGCATTGCTGTGCATCCC GCAAGGGCGCGCGGTGATGCGCGATCCGCGCATCTGGATGGCGCTGACGGTGGGCGCGGTGAGCTGGTTGCCGCTGCTGT TCTGGAATACCGACCATGACGACGCCGGATTGCGCTTTCAATTGGTCGACCGGCATCCGTGGCGTTTTCAGATCGCCGGG CTGTGGTTCCTGCTGATCCAGACGGTGGCGGTGACGCCGCTGTTGGCCTGGGCGATGGTCGAGGTTGGTCTGGCCGGCAA CCGCAGTGGTGGCGGCGCACGTGCGCAATGGCGCTATTTCGGTTTGCTTGGCGGCATGTCGACCATAGCGATCTTCGTGC TCGGCTTCTTCAGCGATGCCGAGCGGATCAGCTTCCACTGGCCGCTACCCGGCTATCTGGCGCTGCTGGTGGCGGTGCCG GTGATCCTGATGCGCTGGCCGCACCCGCTGCGCCGCGCGGCGTGGCTGATCGCACTGCTCGGCATGCTTGGCGCTTACGG CTACTACCTGGCGGTGTCGGTGCCGTCGATCCGCGCGCATGCCGCTGGCGAAAAATACTACCCGCGCAACTTCGCCGGCT GGGACGATCTGGCGCGTGCGGTGAAGTCCCAGCTGGCGCAGATGCCGCCGGGCACGCGCGTGCTGGCAGAAAACTTCAAG GTTGGCGCCGAGCTCGGCTTCAAGTTGCACAACGCCAATGTCGAGGTGCTGCGTGCCGAGTTGAACGACAAGCACGGGCG TAGCGCGCAGCTGCAGCAGTGGGGGGTGCTCAGCGACGGCGCGCGCACCGGGCCGCGGCTACTGGTGCTCTCGCCCAGCG ATCAGCGGTATCGCGAGCTGTTGAAGCGCTACCACGCCATCTGCGAGATGGTCGGCCCGCTGCCGCCGCCGACCGTGGTG TCCATCGATCATGGTTATCAGCGCTTCCTGCTGTTCGCACTGCCTGCCCAACGCCAGCCCGGGTCATGCGTGACCCCGGC GATGGCGTGGATCGACACGCCGCTGCCGAACGTCTCCGTGTCCGGCAAGCTCGAGGTGCGTGGCTGGGCCTTCAAGGATG GCATTGGGCTGTCGAATGTGGAGCTGCTGCTCGATGGTCGCCCGGTCGCGCAAGCTACGTACGGCAAACCGCTCGATGTG CGCCCGTACTGGAAAATCTCCACCGACCCACAGCACCCGAACGTCGGCTTCACCGCCACGCTCGACACCCACGCATTACC GCCCGGCATGCACTGGCTAGGGCTGCGCCTGCACGGCCACGACGGCAGCGTGGAAGATTGGTGGGAACAACCCCTCACTT TCAAAGCTGATGCTCAGTTGCGCCGATCGAGCGTCCACTAG
Upstream 100 bases:
>100_bases TGGTCTTGCGCGCGCCGCAGCGATTGGCGGAGCGCATCGGTTAGCATTTCCGTGGAACGCAGCGGTGTCGACATCACAAT TCCGTAGGTGGAAATGAAGA
Downstream 100 bases:
>100_bases AGCGGTCCGCGAGAGTCGCCACGCCGTTCAAGCAATCTTCTGCGTCGTCCTGCTGCTCTGGCCGAAGGTGTAGGCTGTCG TGAGGAGCGCTGCAAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Glycosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyl Transferase Family; Dolichol Monophosphate Mannose Synthase
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMTAWLARLGVELGGHHLLALRL PFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSALELAI GLVIGALSHYRFVGVIGVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRFQIAG LWFLLIQTVAVTPLLAWAMVEVGLAGNRSGGGARAQWRYFGLLGGMSTIAIFVLGFFSDAERISFHWPLPGYLALLVAVP VILMRWPHPLRRAAWLIALLGMLGAYGYYLAVSVPSIRAHAAGEKYYPRNFAGWDDLARAVKSQLAQMPPGTRVLAENFK VGAELGFKLHNANVEVLRAELNDKHGRSAQLQQWGVLSDGARTGPRLLVLSPSDQRYRELLKRYHAICEMVGPLPPPTVV SIDHGYQRFLLFALPAQRQPGSCVTPAMAWIDTPLPNVSVSGKLEVRGWAFKDGIGLSNVELLLDGRPVAQATYGKPLDV RPYWKISTDPQHPNVGFTATLDTHALPPGMHWLGLRLHGHDGSVEDWWEQPLTFKADAQLRRSSVH
Sequences:
>Translated_626_residues MHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMTAWLARLGVELGGHHLLALRL PFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSALELAI GLVIGALSHYRFVGVIGVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRFQIAG LWFLLIQTVAVTPLLAWAMVEVGLAGNRSGGGARAQWRYFGLLGGMSTIAIFVLGFFSDAERISFHWPLPGYLALLVAVP VILMRWPHPLRRAAWLIALLGMLGAYGYYLAVSVPSIRAHAAGEKYYPRNFAGWDDLARAVKSQLAQMPPGTRVLAENFK VGAELGFKLHNANVEVLRAELNDKHGRSAQLQQWGVLSDGARTGPRLLVLSPSDQRYRELLKRYHAICEMVGPLPPPTVV SIDHGYQRFLLFALPAQRQPGSCVTPAMAWIDTPLPNVSVSGKLEVRGWAFKDGIGLSNVELLLDGRPVAQATYGKPLDV RPYWKISTDPQHPNVGFTATLDTHALPPGMHWLGLRLHGHDGSVEDWWEQPLTFKADAQLRRSSVH >Mature_626_residues MHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMTAWLARLGVELGGHHLLALRL PFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSALELAI GLVIGALSHYRFVGVIGVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRFQIAG LWFLLIQTVAVTPLLAWAMVEVGLAGNRSGGGARAQWRYFGLLGGMSTIAIFVLGFFSDAERISFHWPLPGYLALLVAVP VILMRWPHPLRRAAWLIALLGMLGAYGYYLAVSVPSIRAHAAGEKYYPRNFAGWDDLARAVKSQLAQMPPGTRVLAENFK VGAELGFKLHNANVEVLRAELNDKHGRSAQLQQWGVLSDGARTGPRLLVLSPSDQRYRELLKRYHAICEMVGPLPPPTVV SIDHGYQRFLLFALPAQRQPGSCVTPAMAWIDTPLPNVSVSGKLEVRGWAFKDGIGLSNVELLLDGRPVAQATYGKPLDV RPYWKISTDPQHPNVGFTATLDTHALPPGMHWLGLRLHGHDGSVEDWWEQPLTFKADAQLRRSSVH
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68972; Mature: 68972
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMT CCCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCHH AWLARLGVELGGHHLLALRLPFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSA HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHH TLGILAVPDVPMALAAVLCMDAGARLLREVDATSALELAIGLVIGALSHYRFVGVIGVGC CCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRFQIAG HHHHHCCCCCCEEECCCEEEEEHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCEEEHHH LWFLLIQTVAVTPLLAWAMVEVGLAGNRSGGGARAQWRYFGLLGGMSTIAIFVLGFFSDA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHCCCC ERISFHWPLPGYLALLVAVPVILMRWPHPLRRAAWLIALLGMLGAYGYYLAVSVPSIRAH CEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHH AAGEKYYPRNFAGWDDLARAVKSQLAQMPPGTRVLAENFKVGAELGFKLHNANVEVLRAE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHCEEEECCCEEEEEEE LNDKHGRSAQLQQWGVLSDGARTGPRLLVLSPSDQRYRELLKRYHAICEMVGPLPPPTVV CCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEE SIDHGYQRFLLFALPAQRQPGSCVTPAMAWIDTPLPNVSVSGKLEVRGWAFKDGIGLSNV EECCCHHEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCE ELLLDGRPVAQATYGKPLDVRPYWKISTDPQHPNVGFTATLDTHALPPGMHWLGLRLHGH EEEECCCCCCHHCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECC DGSVEDWWEQPLTFKADAQLRRSSVH CCCHHHHHCCCCCEECCHHHHHCCCC >Mature Secondary Structure MHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMT CCCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCHH AWLARLGVELGGHHLLALRLPFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSA HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHH TLGILAVPDVPMALAAVLCMDAGARLLREVDATSALELAIGLVIGALSHYRFVGVIGVGC CCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRFQIAG HHHHHCCCCCCEEECCCEEEEEHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCEEEHHH LWFLLIQTVAVTPLLAWAMVEVGLAGNRSGGGARAQWRYFGLLGGMSTIAIFVLGFFSDA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHCCCC ERISFHWPLPGYLALLVAVPVILMRWPHPLRRAAWLIALLGMLGAYGYYLAVSVPSIRAH CEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHH AAGEKYYPRNFAGWDDLARAVKSQLAQMPPGTRVLAENFKVGAELGFKLHNANVEVLRAE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHCEEEECCCEEEEEEE LNDKHGRSAQLQQWGVLSDGARTGPRLLVLSPSDQRYRELLKRYHAICEMVGPLPPPTVV CCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEE SIDHGYQRFLLFALPAQRQPGSCVTPAMAWIDTPLPNVSVSGKLEVRGWAFKDGIGLSNV EECCCHHEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCE ELLLDGRPVAQATYGKPLDVRPYWKISTDPQHPNVGFTATLDTHALPPGMHWLGLRLHGH EEEECCCCCCHHCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECC DGSVEDWWEQPLTFKADAQLRRSSVH CCCHHHHHCCCCCEECCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA