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The map label for this gene is ycfF [C]

Identifier: 84622624

GI number: 84622624

Start: 1056579

End: 1056929

Strand: Direct

Name: ycfF [C]

Synonym: XOO_0967

Alternate gene names: 84622624

Gene position: 1056579-1056929 (Clockwise)

Preceding gene: 84622623

Following gene: 84622629

Centisome position: 21.39

GC content: 61.25

Gene sequence:

>351_bases
ATGACCGACACCATCTTCGGCAAAATCATTCGTCGCGAAATCCCGGCCACCATCGTCTATGAAGACGATGAGGTGCTGGG
CTTCCAAGACATCGCACCACAGGCGCCGGTGCATGTGCTCTTCATTCCCAAGCAGCACGCCATTCCGACCTTGGACGATG
TGCCACCGGAGCAGGCGCTGCTGGTCGGTCAGTTGGCCATTGCGGCGGCGGCATATGCGCGCGCACAGGGGCTGGCGCAG
GACGGCTACCGCATTGTGATGAATTGCCGCGAGCATGCCGGCCAGACGGTGTTTCATATCCATCTGCATTTGTTGGCCGG
TGCACCGCTGGGCCGTTTCGGCACGCCGTGA

Upstream 100 bases:

>100_bases
GGCGGGGATTGGGGAGGCGGGATTTGGGATTCGCAAAGCCGTGCTGGCGCGCACGGTAAGCTGTTACCAATCCCGAATCA
CGAATTTCCAATCCCGAACC

Downstream 100 bases:

>100_bases
TGCGTCGGTTGATCGTGCGCTGCGCGCAGTCGGTATAGCGCGGCGATCGTCGCGCACATACAAAAACGCCGCTCCCTGCG
AGCGGCGTTTTTGCGAATAA

Product: histidine triad-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTDTIFGKIIRREIPATIVYEDDEVLGFQDIAPQAPVHVLFIPKQHAIPTLDDVPPEQALLVGQLAIAAAAYARAQGLAQ
DGYRIVMNCREHAGQTVFHIHLHLLAGAPLGRFGTP

Sequences:

>Translated_116_residues
MTDTIFGKIIRREIPATIVYEDDEVLGFQDIAPQAPVHVLFIPKQHAIPTLDDVPPEQALLVGQLAIAAAAYARAQGLAQ
DGYRIVMNCREHAGQTVFHIHLHLLAGAPLGRFGTP
>Mature_115_residues
TDTIFGKIIRREIPATIVYEDDEVLGFQDIAPQAPVHVLFIPKQHAIPTLDDVPPEQALLVGQLAIAAAAYARAQGLAQD
GYRIVMNCREHAGQTVFHIHLHLLAGAPLGRFGTP

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=50.4761904761905, Blast_Score=103, Evalue=3e-23,
Organism=Homo sapiens, GI14211923, Length=107, Percent_Identity=45.7943925233645, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=55.045871559633, Blast_Score=115, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17506713, Length=109, Percent_Identity=49.5412844036697, Blast_Score=114, Evalue=8e-27,
Organism=Drosophila melanogaster, GI28574010, Length=105, Percent_Identity=47.6190476190476, Blast_Score=101, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24581222, Length=105, Percent_Identity=47.6190476190476, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12630; Mature: 12499

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTIFGKIIRREIPATIVYEDDEVLGFQDIAPQAPVHVLFIPKQHAIPTLDDVPPEQAL
CCCHHHHHHHHHHCCEEEEECCCCEECHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH
LVGQLAIAAAAYARAQGLAQDGYRIVMNCREHAGQTVFHIHLHLLAGAPLGRFGTP
HHHHHHHHHHHHHHHHCCCCCCHHEEEECHHHCCCEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TDTIFGKIIRREIPATIVYEDDEVLGFQDIAPQAPVHVLFIPKQHAIPTLDDVPPEQAL
CCHHHHHHHHHHCCEEEEECCCCEECHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH
LVGQLAIAAAAYARAQGLAQDGYRIVMNCREHAGQTVFHIHLHLLAGAPLGRFGTP
HHHHHHHHHHHHHHHHCCCCCCHHEEEECHHHCCCEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]