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The map label for this gene is clpX [H]

Identifier: 84622590

GI number: 84622590

Start: 1017529

End: 1018815

Strand: Direct

Name: clpX [H]

Synonym: XOO_0933

Alternate gene names: 84622590

Gene position: 1017529-1018815 (Clockwise)

Preceding gene: 84622589

Following gene: 84622591

Centisome position: 20.6

GC content: 59.98

Gene sequence:

>1287_bases
ATGAGTGAAGACCGCCAAGGTCGTTCCGGCGACAGCAACAAGATTCTTTACTGCTCGTTCTGCGGTAAGAGTCAGCATGA
AGTCCGTAAGCTGATTGCCGGTCCCAGCGTATTCATCTGCGATGAGTGCGTTGAGCTGTGCAACGACATCATCCGCGAGG
AACTCGAAGAGAAGGCGCAGTCGGCACGCTCCAGCCTGCCCAAGCCGCGCGAGATCCTCGAGGTGCTGGATCAATACGTG
ATCGGGCAGTTGCGCGCCAAGCGCACGCTTGCGGTAGCGGTGTACAACCACTACAAGCGTATCGAGAGCCGCAGCAAGAA
CGATGACGTCGAGCTGGCGAAATCCAACATTCTGCTGGTCGGTCCGACCGGTTCGGGCAAGACGCTGCTGGCCGAAACGC
TGGCCCGCTTGCTCAACGTGCCGTTCACGATCGCCGATGCCACCACGCTGACCGAAGCCGGCTATGTCGGCGAGGACGTG
GAAAACATCATCCAGAAGCTGCTGCAGAAGTGCGACTACGACGTCGAAAAGGCGCAGCAGGGCATCGTCTATATCGACGA
AATCGACAAGATCTCGCGCAAGAGCGAGAACCCGTCGATCACCCGCGACGTGTCCGGCGAAGGCGTGCAGCAAGCGCTGC
TAAAGCTGATCGAAGGCACGGTTGCTTCGGTGCCGCCGCAGGGTGGCCGTAAGCACCCGCAACAGGAATTCCTGCAGGTC
GACACCAAGAACATCCTGTTCATCTGCGGCGGCGCGTTCGCCGGCCTGGATAAGGTGATTCAGCAGCGTTCCAACGATGC
CGGTGGTATTGGCTTCGGTGCCAAGGTCAAGAGCAGCGAGCGCAAGCAGGAAGTGGGCAAGATCCTGGCCGAAGTCGAGC
CGGAAGATCTGATCAAGTTCGGTCTGATTCCGGAATTTGTCGGTCGCCTGCCGGTGGTCGCCACGCTGGAAGAGCTGGAT
GAGCCGGCGCTGATCAAGATCCTGACCGAGCCCAAGAACGCCATCACCAAGCAGTTCAAGAAGCTGTTCGATATGGAGGG
TGTGGAACTGGAGTTCCGCGCCGACGCCCTGTCTGCGATCGCCAAGAAGGCGCTCAAGCGCAAGACCGGCGCGCGTGGCC
TGCGCACCATCGTCGAATCGGTGCTGCTGGACACCATGTACGAGCTGCCGTCGCAGGAAAATGTCAGCAAGGTGGTGGTG
GACGAGTCGGTGATCGAGCACAAGTCCGAGCCTTATCTGATCTACCAGGCGCAACCGGCACCGGCAAAGGCTGCGTCCGG
CGACTGA

Upstream 100 bases:

>100_bases
AAAACCGGCAGGGTCGGGCGGGGCGAATGTCCTCCCGACCCTGTGCTATTCTCGAAATCGAACCCCCGTGCATCGGGTGG
GGTAACTGGGTAACAGAAGC

Downstream 100 bases:

>100_bases
GCCTTGCTGCCGCCTCGCCAGGCCCTGGCCTCGCTTGCGGCTAAAGGCTTTCCGAGCGCCACTTGCAACACCTCGCCGAT
GGCCCCATAACGGGGCCATC

Product: ATP-dependent protease ATP-binding subunit ClpX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSEDRQGRSGDSNKILYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREELEEKAQSARSSLPKPREILEVLDQYV
IGQLRAKRTLAVAVYNHYKRIESRSKNDDVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELD
EPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYELPSQENVSKVVV
DESVIEHKSEPYLIYQAQPAPAKAASGD

Sequences:

>Translated_428_residues
MSEDRQGRSGDSNKILYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREELEEKAQSARSSLPKPREILEVLDQYV
IGQLRAKRTLAVAVYNHYKRIESRSKNDDVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELD
EPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYELPSQENVSKVVV
DESVIEHKSEPYLIYQAQPAPAKAASGD
>Mature_427_residues
SEDRQGRSGDSNKILYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREELEEKAQSARSSLPKPREILEVLDQYVI
GQLRAKRTLAVAVYNHYKRIESRSKNDDVELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE
NIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVD
TKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDE
PALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYELPSQENVSKVVVD
ESVIEHKSEPYLIYQAQPAPAKAASGD

Specific function: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP [H]

COG id: COG1219

COG function: function code O; ATP-dependent protease Clp, ATPase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpX chaperone family [H]

Homologues:

Organism=Homo sapiens, GI7242140, Length=345, Percent_Identity=52.463768115942, Blast_Score=328, Evalue=6e-90,
Organism=Escherichia coli, GI1786642, Length=429, Percent_Identity=75.2913752913753, Blast_Score=646, Evalue=0.0,
Organism=Escherichia coli, GI1790366, Length=101, Percent_Identity=46.5346534653465, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71982908, Length=317, Percent_Identity=46.0567823343849, Blast_Score=277, Evalue=9e-75,
Organism=Caenorhabditis elegans, GI71982905, Length=319, Percent_Identity=46.3949843260188, Blast_Score=277, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI71988663, Length=408, Percent_Identity=37.9901960784314, Blast_Score=256, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI71988660, Length=247, Percent_Identity=40.4858299595142, Blast_Score=174, Evalue=7e-44,
Organism=Saccharomyces cerevisiae, GI6319704, Length=454, Percent_Identity=38.5462555066079, Blast_Score=278, Evalue=8e-76,
Organism=Drosophila melanogaster, GI24648291, Length=304, Percent_Identity=48.3552631578947, Blast_Score=291, Evalue=4e-79,
Organism=Drosophila melanogaster, GI24648289, Length=304, Percent_Identity=48.3552631578947, Blast_Score=291, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR019489
- InterPro:   IPR004487
- InterPro:   IPR010603 [H]

Pfam domain/function: PF07724 AAA_2; PF10431 ClpB_D2-small; PF06689 zf-C4_ClpX [H]

EC number: NA

Molecular weight: Translated: 47110; Mature: 46978

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDRQGRSGDSNKILYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREELEEKAQ
CCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
SARSSLPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSKNDDVELAKSNILLV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEE
GPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQ
ECCCCCCHHHHHHHHHHHCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHC
GIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
CCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHH
DTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKF
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
GLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAI
CCCHHHHCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
AKKALKRKTGARGLRTIVESVLLDTMYELPSQENVSKVVVDESVIEHKSEPYLIYQAQPA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
PAKAASGD
CCCCCCCC
>Mature Secondary Structure 
SEDRQGRSGDSNKILYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREELEEKAQ
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
SARSSLPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRSKNDDVELAKSNILLV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEE
GPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQ
ECCCCCCHHHHHHHHHHHCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHC
GIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
CCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHH
DTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSERKQEVGKILAEVEPEDLIKF
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
GLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFDMEGVELEFRADALSAI
CCCHHHHCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
AKKALKRKTGARGLRTIVESVLLDTMYELPSQENVSKVVVDESVIEHKSEPYLIYQAQPA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
PAKAASGD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA