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The map label for this gene is tnpA [H]

Identifier: 84622556

GI number: 84622556

Start: 984627

End: 985805

Strand: Direct

Name: tnpA [H]

Synonym: XOO_0899

Alternate gene names: 84622556

Gene position: 984627-985805 (Clockwise)

Preceding gene: 84622555

Following gene: 84622557

Centisome position: 19.93

GC content: 63.53

Gene sequence:

>1179_bases
ATGACGGCCAAGGTGTTTGAAGCGGCGCTGGGGATCGGCGCGCCGTGGTCGGTAGGCGCGGTCGAGTTCGACGAAGCGAC
CAAGGTGTTGACGGTGCCGGTGGACTTCAAGCCGGGCACGAGGTTCAAGGTATCGGGCCAAAAGGGGCTGCATCCGGTTC
ATGACACCGTGGTCAAGACCTACCGGCACCTGAACTTTTTCCAGCACGAGTGCTACCTGAAGGTTCGCACGCCGCGTGTG
AAGCTTGGTGACGGATCGGTTCGCCTGGTCGAGCCGGACTTCGCTGGGCGGTTGTCGGGCTTCACGCTGTTGTTCGAGGC
GCTGGTGCTGATGTTGTCGCAGCAGATGCCGTTCGCGGCCGTTGCGCGCATCGTGGGCGAGTCGGCGTACCGGTGCATGC
AGGTGTGCAACCGCTATGTCGAGATGGCCCTGGAGCAGGCCGACTTCAGCGACGTCACGTCGCTGGCCATCGACGAGACG
TCGCGCGCTCGCGGCCACGACTATGTGACCTTGGCTGCCGACGCCCAGGCGCGACGCGTGATCTTCGTGACTGAGGGGCG
GGACGCCAAAGCCGTGAAGGCGCTGGCTGCCGATCTGGCAGCTCATGGCTGCCCTCCCGAACAGATCACCTCGGTGAGCA
TCGACATGTCGCCCGCGTTCATCAAGGGCGTAAGCGACCAGTTGCCCAACGCGCAGATCACCTTCGACAAGTTCCACGTT
GTCGGACATGCGAACGCGGCCGTGGACAAAACCAGGCGCATCGAGCAGCGCACCGAGAAGTCCCTCAAGGGCATGCGCTG
GACGCTGCTCAAGGATGTCTTCAGCCTCAAACCGACGGCCGGCGCAGCATTGCACGGGCTGATCACGGCACCCAAGCTCA
CACGGACGGCCCGCGCGTGGCTCTACAAGGAGCAGTTGCGCGAGGCGCTTGACCGAAGCCAGATCAACGTGATGCGCGAG
AGGCTCAAGCACTGGTGCGTCTGCGTGATGCGATCCAAGGTCGAGGCGATGAAGAAGTCGCAGCCCTCGTGCGCCGCCAC
ATGGACGGCATCGTCGCCTGGGCGCAGACCCGTCAGACCAACGGCTTCCTTGAAGCCATCAATGGCCTGTTCCAGTCCGC
CAAGCGCAGAGCTCGCGGCTTCAAACGCCTGTCCACCATCAAGACCGTCATCTTCCTGA

Upstream 100 bases:

>100_bases
CGGTTGTTGGCACAGCGCCCCAAGGACAAACAAAAACTGGCTCTCTGAAAATTTGAGTGGGTAGGATTTCGGGTGGTTTA
CCACTGACGCGGGGATTGGG

Downstream 100 bases:

>100_bases
TTGCCGGCAAGCTGGACTTCCAAACGTTCAACCCGCATGCCCGGCAACCCACTTGAAATTCAAGAGAGCCCAAAAACTCT
ACGCCTTGCACGCGCCGGAA

Product: ISXoo13 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRV
KLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDET
SRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHV
VGHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAWLYKEQLREALDRSQINVMRE
RLKHWCVCVMRSKVEAMKKSQPSCAATWTASSPGRRPVRPTASLKPSMACSSPPSAELAASNACPPSRPSSS

Sequences:

>Translated_392_residues
MTAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRV
KLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDET
SRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHV
VGHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAWLYKEQLREALDRSQINVMRE
RLKHWCVCVMRSKVEAMKKSQPSCAATWTASSPGRRPVRPTASLKPSMACSSPPSAELAASNACPPSRPSSS
>Mature_391_residues
TAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVK
LGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETS
RARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVV
GHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAWLYKEQLREALDRSQINVMRER
LKHWCVCVMRSKVEAMKKSQPSCAATWTASSPGRRPVRPTASLKPSMACSSPPSAELAASNACPPSRPSSS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 42954; Mature: 42823

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKT
CCHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHH
YRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAA
HHHHHHHCEEEEEEEECCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETSRARGHDYVTLAADAQARRV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEE
IFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHV
EEEECCCCHHHHHHHHHHHHHCCCCHHHHEEEEEECCHHHHHCHHHCCCCCEEEEEEEEE
VGHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAW
EECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHH
LYKEQLREALDRSQINVMRERLKHWCVCVMRSKVEAMKKSQPSCAATWTASSPGRRPVRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
TASLKPSMACSSPPSAELAASNACPPSRPSSS
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKT
CHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHH
YRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAA
HHHHHHHCEEEEEEEECCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETSRARGHDYVTLAADAQARRV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEE
IFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHV
EEEECCCCHHHHHHHHHHHHHCCCCHHHHEEEEEECCHHHHHCHHHCCCCCEEEEEEEEE
VGHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAW
EECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHH
LYKEQLREALDRSQINVMRERLKHWCVCVMRSKVEAMKKSQPSCAATWTASSPGRRPVRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
TASLKPSMACSSPPSAELAASNACPPSRPSSS
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]