Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622557
Identifier: 84622557
GI number: 84622557
Start: 985858
End: 986448
Strand: Direct
Name: 84622557
Synonym: XOO_0900
Alternate gene names: NA
Gene position: 985858-986448 (Clockwise)
Preceding gene: 84622556
Following gene: 84622561
Centisome position: 19.96
GC content: 61.59
Gene sequence:
>591_bases TTGAAATTCAAGAGAGCCCAAAAACTCTACGCCTTGCACGCGCCGGAAGTGGAATGCATGAGCAAGGGCAAGGCCCGCCA ACCGTACGAATTTGGCGTCAAGGTCGGCATTGCGGTGAGTGCGCGCAAGGGCTTGATCGTGGGCGCGCGCAGTTTTCCCG GCAATCCCTACGACGGCGATACGTTGGCCGAGCAACTGGAACAGGCGCGCGGGCTGCTGCAGGATGTGGATGTGATCCCG CAGGTGGCGATTGTGGATCTGGGGTATCGCGGGCGCGACGTGGAGGGTGTGCAGATCCTGCATCGGGGCAAAGCCAAGAC GCTGACACGACGGCAATGGCGCTGGATCAAACGACGGCAAGCAGTTGAGCCGGTGATCGGACATCTGAAACAGGACTGCC GCTTGAATCGCTGCCATCTCAAAGGCGCCCAAGGCGATGCACTGCACGTGCTCGGCTGCGCCGCTGGCGACAACCTGCGG TGGCGGCTGCGCTGGATCGCATGTTTGCGTGCCTGGTTGCAGGTGGTGCGGGCGCGTTCCTCAATGTCCTCAAGCACCAT GTGGCCCGCAAACATGGCACTGGAGGTTTGA
Upstream 100 bases:
>100_bases CTCGCGGCTTCAAACGCCTGTCCACCATCAAGACCGTCATCTTCCTGATTGCCGGCAAGCTGGACTTCCAAACGTTCAAC CCGCATGCCCGGCAACCCAC
Downstream 100 bases:
>100_bases GAGGGGTTTTTCAGGGCGACTCTTTATCAGCCGTGGTCCTGCCTCTGGGTAGCGCCCGCGTCATCGTCCGCCGGCGCCAG TTCCCAACCGGTGTTTTCAT
Product: ISXoo4 transposase
Products: NA
Alternate protein names: Transposase; ISXoo4 Transposase; ISXoo5 Transposase; ISPg7 Transposase; Transposase Protein; Isxoo4 Transposase Protein; Transposase Of Disrupted Insertion Sequence; ISRSO9-Transposase Protein; Transposase IS4 Family; Transposase IS5 Family; IS5 Family Transposase
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVDVIP QVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLR WRLRWIACLRAWLQVVRARSSMSSSTMWPANMALEV
Sequences:
>Translated_196_residues MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVDVIP QVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLR WRLRWIACLRAWLQVVRARSSMSSSTMWPANMALEV >Mature_196_residues MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVDVIP QVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLR WRLRWIACLRAWLQVVRARSSMSSSTMWPANMALEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22065; Mature: 22065
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGD CCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHCEEEEEEEECCCCEEEECCCCCCCCCCHH TLAEQLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQ HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH AVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWRLRWIACLRAWLQVVRARS HHHHHHHHHHHHCCCCHHEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SMSSSTMWPANMALEV HCCCCCCCCCCCEEEC >Mature Secondary Structure MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGD CCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHCEEEEEEEECCCCEEEECCCCCCCCCCHH TLAEQLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQ HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH AVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWRLRWIACLRAWLQVVRARS HHHHHHHHHHHHCCCCHHEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SMSSSTMWPANMALEV HCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA