Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84622557

Identifier: 84622557

GI number: 84622557

Start: 985858

End: 986448

Strand: Direct

Name: 84622557

Synonym: XOO_0900

Alternate gene names: NA

Gene position: 985858-986448 (Clockwise)

Preceding gene: 84622556

Following gene: 84622561

Centisome position: 19.96

GC content: 61.59

Gene sequence:

>591_bases
TTGAAATTCAAGAGAGCCCAAAAACTCTACGCCTTGCACGCGCCGGAAGTGGAATGCATGAGCAAGGGCAAGGCCCGCCA
ACCGTACGAATTTGGCGTCAAGGTCGGCATTGCGGTGAGTGCGCGCAAGGGCTTGATCGTGGGCGCGCGCAGTTTTCCCG
GCAATCCCTACGACGGCGATACGTTGGCCGAGCAACTGGAACAGGCGCGCGGGCTGCTGCAGGATGTGGATGTGATCCCG
CAGGTGGCGATTGTGGATCTGGGGTATCGCGGGCGCGACGTGGAGGGTGTGCAGATCCTGCATCGGGGCAAAGCCAAGAC
GCTGACACGACGGCAATGGCGCTGGATCAAACGACGGCAAGCAGTTGAGCCGGTGATCGGACATCTGAAACAGGACTGCC
GCTTGAATCGCTGCCATCTCAAAGGCGCCCAAGGCGATGCACTGCACGTGCTCGGCTGCGCCGCTGGCGACAACCTGCGG
TGGCGGCTGCGCTGGATCGCATGTTTGCGTGCCTGGTTGCAGGTGGTGCGGGCGCGTTCCTCAATGTCCTCAAGCACCAT
GTGGCCCGCAAACATGGCACTGGAGGTTTGA

Upstream 100 bases:

>100_bases
CTCGCGGCTTCAAACGCCTGTCCACCATCAAGACCGTCATCTTCCTGATTGCCGGCAAGCTGGACTTCCAAACGTTCAAC
CCGCATGCCCGGCAACCCAC

Downstream 100 bases:

>100_bases
GAGGGGTTTTTCAGGGCGACTCTTTATCAGCCGTGGTCCTGCCTCTGGGTAGCGCCCGCGTCATCGTCCGCCGGCGCCAG
TTCCCAACCGGTGTTTTCAT

Product: ISXoo4 transposase

Products: NA

Alternate protein names: Transposase; ISXoo4 Transposase; ISXoo5 Transposase; ISPg7 Transposase; Transposase Protein; Isxoo4 Transposase Protein; Transposase Of Disrupted Insertion Sequence; ISRSO9-Transposase Protein; Transposase IS4 Family; Transposase IS5 Family; IS5 Family Transposase

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVDVIP
QVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLR
WRLRWIACLRAWLQVVRARSSMSSSTMWPANMALEV

Sequences:

>Translated_196_residues
MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVDVIP
QVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLR
WRLRWIACLRAWLQVVRARSSMSSSTMWPANMALEV
>Mature_196_residues
MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVDVIP
QVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLR
WRLRWIACLRAWLQVVRARSSMSSSTMWPANMALEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22065; Mature: 22065

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGD
CCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHCEEEEEEEECCCCEEEECCCCCCCCCCHH
TLAEQLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQ
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
AVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWRLRWIACLRAWLQVVRARS
HHHHHHHHHHHHCCCCHHEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SMSSSTMWPANMALEV
HCCCCCCCCCCCEEEC
>Mature Secondary Structure
MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGD
CCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHCEEEEEEEECCCCEEEECCCCCCCCCCHH
TLAEQLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQ
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
AVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWRLRWIACLRAWLQVVRARS
HHHHHHHHHHHHCCCCHHEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SMSSSTMWPANMALEV
HCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA