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The map label for this gene is rob [C]

Identifier: 84622526

GI number: 84622526

Start: 950315

End: 951208

Strand: Direct

Name: rob [C]

Synonym: XOO_0869

Alternate gene names: 84622526

Gene position: 950315-951208 (Clockwise)

Preceding gene: 84622525

Following gene: 84622527

Centisome position: 19.24

GC content: 61.74

Gene sequence:

>894_bases
ATGCAACAGGTCATCACCGCAGATCGCGGACTTGCGCTCACGCTGGATAGCGACAGCGAGTCGACATCGACCACCTGCCT
GGCGGTCTCTCGGCTCGGCAGCATTCGCACCAACGCAGCAACATTCACCTTGTGGGTGCAGTTGCGTGGACGCGCATGGG
TGGAATCCAAGGAGGGACGGTTCCGTCTGCGTGCTGGCGACTGGATCGCCTTCGATAAAGACTCCCATCCCAACGTGCAG
GCAGACCGCAGCGCGCTGTGTGTGGGCGTCAGCCTGGATAGCGATAGCCTGCAATCACTCACCGAGCTGACCGATGCCAC
CCTGTATCCGGGCCGCGCCCAGTTGTCGCACAGCGATCTGTGCATTGCACTGCGGTTGTGGCGTAACGCTGCAGCACAGA
GCGTCAGTGCATCCGCCCGTCCGCTGCTGCTGCATCTGGCGGCGATGCAGCGCGACTTCACCGAACAAGAGCAGCGTTGC
CCGGGCCGCTCGCGCAGCCGTCGGCGTCAGGTGTTCGGCCGCATGCAGCGTGCGCGGCTGTACCTGGAAGGCAACAGCGA
CCGCGTGGTACGCATCAGCGAACTCGCCCAGCTAACCAACTTTTCCAGTTGGTACGTCTCCAAGACGTTCCAGAGCTTGT
ACGAAGAAAGTCCGCAGGCGCTATCGGCACGCTTGCGTCTGGAGCGTGCCTCCGATTTGTTGCGCGATACCTCGATGATG
ATCGGCGAGGTGGCAGCCGCAAGCGGCTTCGACAATTGCTGCAGCTTCGCGCGTGCGTTTCGTGCACGCTTCGGTGTGTC
CGCGTCGCACTACCGCGACCAAACGGTAAATCCGCCAGATTCGGCAAATCCACGTAACGTGACGCGCAAAGCGACGGTTT
TCACGCAATCGTAA

Upstream 100 bases:

>100_bases
AAGGCTTCGTGGCAATTTCGGCACAGTTTCGTCATAACTTCCTGACTGATGCCAGATGCGGCAAAACACTACGCCCTCTT
TTGTACGGGGGGCTGCCAAC

Downstream 100 bases:

>100_bases
TTTGCACAGGGGCGCTTAACGCGCCACTAACGAACCCTGGAGAGATTGATGAACCTTCGCACCTCCGCAGTGCGGCTGGG
CCTGTTGCCCGCCGGTATTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Hth Transcriptional Regulator

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQQVITADRGLALTLDSDSESTSTTCLAVSRLGSIRTNAATFTLWVQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPNVQ
ADRSALCVGVSLDSDSLQSLTELTDATLYPGRAQLSHSDLCIALRLWRNAAAQSVSASARPLLLHLAAMQRDFTEQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTVNPPDSANPRNVTRKATVFTQS

Sequences:

>Translated_297_residues
MQQVITADRGLALTLDSDSESTSTTCLAVSRLGSIRTNAATFTLWVQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPNVQ
ADRSALCVGVSLDSDSLQSLTELTDATLYPGRAQLSHSDLCIALRLWRNAAAQSVSASARPLLLHLAAMQRDFTEQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTVNPPDSANPRNVTRKATVFTQS
>Mature_297_residues
MQQVITADRGLALTLDSDSESTSTTCLAVSRLGSIRTNAATFTLWVQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPNVQ
ADRSALCVGVSLDSDSLQSLTELTDATLYPGRAQLSHSDLCIALRLWRNAAAQSVSASARPLLLHLAAMQRDFTEQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTVNPPDSANPRNVTRKATVFTQS

Specific function: Binds To The Right Arm Of The Replication Origin Oric Of The E.Coli Chromosome. Rob Binding May Influence The Formation Of The Nucleoprotein Structure, Required For Oric Function In The Initiation Of Replication. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33137; Mature: 33137

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVITADRGLALTLDSDSESTSTTCLAVSRLGSIRTNAATFTLWVQLRGRAWVESKEGR
CCCCEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCC
FRLRAGDWIAFDKDSHPNVQADRSALCVGVSLDSDSLQSLTELTDATLYPGRAQLSHSDL
EEEEECCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHH
CIALRLWRNAAAQSVSASARPLLLHLAAMQRDFTEQEQRCPGRSRSRRRQVFGRMQRARL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEE
YLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTVNPPDSANPRNVTRKATVFTQS
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MQQVITADRGLALTLDSDSESTSTTCLAVSRLGSIRTNAATFTLWVQLRGRAWVESKEGR
CCCCEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCC
FRLRAGDWIAFDKDSHPNVQADRSALCVGVSLDSDSLQSLTELTDATLYPGRAQLSHSDL
EEEEECCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHH
CIALRLWRNAAAQSVSASARPLLLHLAAMQRDFTEQEQRCPGRSRSRRRQVFGRMQRARL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEE
YLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTVNPPDSANPRNVTRKATVFTQS
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA