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The map label for this gene is cadC [H]

Identifier: 84622525

GI number: 84622525

Start: 947853

End: 950204

Strand: Direct

Name: cadC [H]

Synonym: XOO_0868

Alternate gene names: 84622525

Gene position: 947853-950204 (Clockwise)

Preceding gene: 84622524

Following gene: 84622526

Centisome position: 19.19

GC content: 65.09

Gene sequence:

>2352_bases
ATGCCATCAGACCGGCTGCGTGTCGGTCAGTGCGTGGTCGACGTTGCCTCGCGCGAGGTGCACGCGCCGGGTGCGGAGCG
ACCGCTGCGTCTGGCGCCCAAATCCCTGGCGGTGTTGCTGGCCCTGGCGCGCCAGCCGGGCCAGGTGGTCACGCGCGAGC
AGCTGCTTGCCGAGGTTTGGCCCGATACCTTGCCGACCAACGATGTAGTGACCCAGGCGGTCACGCAGCTGCGCAAGGCG
TTCGCCAGTCACGGCGGGCAGCGTTCGGAGCATATCGAGACCATTGCCAAGACCGGGTATCGCTTGATGGCGGCGGTTGT
GTGGGAAGCGCATGCGCCGGGATCGACGACCCTGCCGCAGGAGTCACCCGGTGTGCAATCGCCCGAGCTGGCGCAAGCGG
ACGATGGGGCTGTACCTGCATCCGTATCGGTCTGCGAGCAGTCCGGCGCTGCTGCCCAACCCATCCGCCCGGCGTCTGCG
CAGCCTGGAGTTCCCGTCGCTGAGAGGCCGGCTGCGCCACTGCAGCGGCGTTGGACGGCACTGGCAGTTGCCAGCGTGGC
ATTGCTGGTCGTGCTGGACCTTGCAGTACAGATCATGTGGCGACGGGTTCCGGCATCTGGGGCTGCGCAAGCGTCTGCGG
TGTTAGGCAGCCCTAAACGGCCGTATCAGGTGATCACCGCAGGCGGCGGGTTCGATCTTACGCCGAGCCTGTCGCCGGAT
GGCGCGATGGTGGCGTACGCCTCCTTGACCGGTGATCGCACCGGCACCTCGATCCTGGTCAAGACGACCGATAACGCCTA
TCCGCGTGTGCTGGAGACGCCCGCGCCGGGCGTGTCCGATCGTTTGCCGGCGTGGTCGCCGGATGGCCGCGAGATCGCCT
TTTCCAGGCAGGCGCCCGATGGGAGCTGCCGGGTGATGATTGCCGCCGCCACCGGGCCGGCGGCGGCACGCGAAGTGGTG
CGGTGCGACCGTGCGGACATGCTGAGTTTCAGCTGGTCGCCGGACGCGCGCGCGCTGCTGTTCGGCAGCATGACCGGCAG
CTACGGCGCAGCACGCATACGTCGCCTGAATCTGGAAACCGGGCAGTGGCAGACGCTGAACTATCCTGCGCAAGCCGGTG
ATTTCGATTACGCACCGCGTTATTCGCCTGATGGGCATTGGATCGTATTCCTGCGTAATCCGCAGCTTGGCGATCTGTGG
CGGATTCCTGCCGAAGGCGGCGCTGCCGAACGGCTCACCCACGACACTGCCGATATCTGGGGCTGGAGCTGGTTGCCCGA
CGGCAGCGGTGTGATCTTCGGGCGTCGCGTGGACATTGAGGCGCGGCTGTATCGGCTCGATCTGCTCGACAGCAGCCTGC
ACGACCTGGGCGTGGACGATGCGCAGGCACCGGATGTGGCGCATGGCCATCTGGTATTTGCGCAACGCAAACCGCAATTC
GGTGTGTATCAAGTCATTCGCGACACGATGAATGGTGGCTACATTCGACGGCGCCTGTTTTCTTCGAGTGGGCGCGACGA
TCAGCCGATGATCGCGCCGGACGGGCGTCAGTTGGTCTTTGCCTCCAACCGCTCCGGTACGTACGGGTTGTGGTGGGGCG
ATGTCAGCAAGCCAGGCTCGGTGCGCCTGATCGAAGGGCTGCGGCCGGATTCGCGTCAGGCCGCCGACTGGTCGGCCGAT
TCGCAACGCCTGCTGGTCAGCGGCAGCGATGCGGCCGGGCACGCGGCGCTATTCGAAGTGACCCCCAGTAGCGGCAAGGT
GGTGCGCCTGCCGGTGCCGCAACCGCGTCCGTTGCAGGCGATCCATCTTCCCGATCCCGACCAGGTGCTGGTACTTGCTG
CCGCAGACGACGGGCATACCTTCGCCACGCTGTACGACCGACGCAGCAGCCCATGGCGTGCGCTGGCAACGCTGCAGGAC
GTTTCGCAGGTACGACTGGATCGCATCAGCGGACAGGTGCTGCTCACCCGTCTCAGCGGTGGAGGTGTCTGGCAGGTCGC
TCCGTCGCTTGCCGCCGATACCTTGCAAGCCATCGATTCGAAACAGCCATCGCGGTGGCGTTATCGCAGCTGGGCACCAG
GGGCCCATGGCGATCTGCATTACCTGTCTTCGACCGATACCTGCTCCACCTACGATGGCGAGCTACGCAGCGTTGGCGGC
CAGTGTCTGGACGCGGTCAAGTTCACCGCGATCAATGGTTTCAGCGTAGACCAGCACGACGGTGCACTCTATGTGGCGCT
GGCAGAAGAAGATGGCAGTTCGATCGCCTACATGCCGCTGCCGCAGCGTTCCGTTGCGTCCATCTGTGTCTTGGCTAACC
TCTTGTCGATATTGAGGAAAATCGCCTCGTAA

Upstream 100 bases:

>100_bases
TGCTGAATTTGGCGTTTCGCCTGTTCTGCGATGCGCTCTTTGTAGTCCTTTGCATGTCGATGTGTGTTTTTTGCCGATGA
GTGTTCCTTCCGTTTCTGCA

Downstream 100 bases:

>100_bases
ATTTTTCGGAAAGGCTTCGTGGCAATTTCGGCACAGTTTCGTCATAACTTCCTGACTGATGCCAGATGCGGCAAAACACT
ACGCCCTCTTTTGTACGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 782

Protein sequence:

>783_residues
MPSDRLRVGQCVVDVASREVHAPGAERPLRLAPKSLAVLLALARQPGQVVTREQLLAEVWPDTLPTNDVVTQAVTQLRKA
FASHGGQRSEHIETIAKTGYRLMAAVVWEAHAPGSTTLPQESPGVQSPELAQADDGAVPASVSVCEQSGAAAQPIRPASA
QPGVPVAERPAAPLQRRWTALAVASVALLVVLDLAVQIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPD
GAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAAREVV
RCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLW
RIPAEGGAAERLTHDTADIWGWSWLPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQF
GVYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLIEGLRPDSRQAADWSAD
SQRLLVSGSDAAGHAALFEVTPSSGKVVRLPVPQPRPLQAIHLPDPDQVLVLAAADDGHTFATLYDRRSSPWRALATLQD
VSQVRLDRISGQVLLTRLSGGGVWQVAPSLAADTLQAIDSKQPSRWRYRSWAPGAHGDLHYLSSTDTCSTYDGELRSVGG
QCLDAVKFTAINGFSVDQHDGALYVALAEEDGSSIAYMPLPQRSVASICVLANLLSILRKIAS

Sequences:

>Translated_783_residues
MPSDRLRVGQCVVDVASREVHAPGAERPLRLAPKSLAVLLALARQPGQVVTREQLLAEVWPDTLPTNDVVTQAVTQLRKA
FASHGGQRSEHIETIAKTGYRLMAAVVWEAHAPGSTTLPQESPGVQSPELAQADDGAVPASVSVCEQSGAAAQPIRPASA
QPGVPVAERPAAPLQRRWTALAVASVALLVVLDLAVQIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPD
GAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAAREVV
RCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLW
RIPAEGGAAERLTHDTADIWGWSWLPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQF
GVYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLIEGLRPDSRQAADWSAD
SQRLLVSGSDAAGHAALFEVTPSSGKVVRLPVPQPRPLQAIHLPDPDQVLVLAAADDGHTFATLYDRRSSPWRALATLQD
VSQVRLDRISGQVLLTRLSGGGVWQVAPSLAADTLQAIDSKQPSRWRYRSWAPGAHGDLHYLSSTDTCSTYDGELRSVGG
QCLDAVKFTAINGFSVDQHDGALYVALAEEDGSSIAYMPLPQRSVASICVLANLLSILRKIAS
>Mature_782_residues
PSDRLRVGQCVVDVASREVHAPGAERPLRLAPKSLAVLLALARQPGQVVTREQLLAEVWPDTLPTNDVVTQAVTQLRKAF
ASHGGQRSEHIETIAKTGYRLMAAVVWEAHAPGSTTLPQESPGVQSPELAQADDGAVPASVSVCEQSGAAAQPIRPASAQ
PGVPVAERPAAPLQRRWTALAVASVALLVVLDLAVQIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPDG
AMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAAREVVR
CDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLWR
IPAEGGAAERLTHDTADIWGWSWLPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQFG
VYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLIEGLRPDSRQAADWSADS
QRLLVSGSDAAGHAALFEVTPSSGKVVRLPVPQPRPLQAIHLPDPDQVLVLAAADDGHTFATLYDRRSSPWRALATLQDV
SQVRLDRISGQVLLTRLSGGGVWQVAPSLAADTLQAIDSKQPSRWRYRSWAPGAHGDLHYLSSTDTCSTYDGELRSVGGQ
CLDAVKFTAINGFSVDQHDGALYVALAEEDGSSIAYMPLPQRSVASICVLANLLSILRKIAS

Specific function: Required for Pcad induction, a promoter upstream of cadB that is responsible for the pH-regulated expression of cadA [H]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790576, Length=130, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 84112; Mature: 83980

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSDRLRVGQCVVDVASREVHAPGAERPLRLAPKSLAVLLALARQPGQVVTREQLLAEVW
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PDTLPTNDVVTQAVTQLRKAFASHGGQRSEHIETIAKTGYRLMAAVVWEAHAPGSTTLPQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCC
ESPGVQSPELAQADDGAVPASVSVCEQSGAAAQPIRPASAQPGVPVAERPAAPLQRRWTA
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LAVASVALLVVLDLAVQIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
GAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPD
CCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
GSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLET
CCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCC
GQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLWRIPAEGGAAERLTHDTADIW
CCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHCCCCHHHC
GWSWLPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQF
CEEECCCCCCEEEEEEECCEEEEEEEEHHHCHHHHCCCCCCCCCCCCCCEEEEEECCCCC
GVYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGS
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCEEEEEECCCCCCCC
VRLIEGLRPDSRQAADWSADSQRLLVSGSDAAGHAALFEVTPSSGKVVRLPVPQPRPLQA
EEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCEE
IHLPDPDQVLVLAAADDGHTFATLYDRRSSPWRALATLQDVSQVRLDRISGQVLLTRLSG
EECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
GGVWQVAPSLAADTLQAIDSKQPSRWRYRSWAPGAHGDLHYLSSTDTCSTYDGELRSVGG
CCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHH
QCLDAVKFTAINGFSVDQHDGALYVALAEEDGSSIAYMPLPQRSVASICVLANLLSILRK
HHHHHHHEEEECCCCEECCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
IAS
HCC
>Mature Secondary Structure 
PSDRLRVGQCVVDVASREVHAPGAERPLRLAPKSLAVLLALARQPGQVVTREQLLAEVW
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PDTLPTNDVVTQAVTQLRKAFASHGGQRSEHIETIAKTGYRLMAAVVWEAHAPGSTTLPQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCC
ESPGVQSPELAQADDGAVPASVSVCEQSGAAAQPIRPASAQPGVPVAERPAAPLQRRWTA
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LAVASVALLVVLDLAVQIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
GAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPD
CCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
GSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLET
CCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCC
GQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLWRIPAEGGAAERLTHDTADIW
CCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHCCCCHHHC
GWSWLPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQF
CEEECCCCCCEEEEEEECCEEEEEEEEHHHCHHHHCCCCCCCCCCCCCCEEEEEECCCCC
GVYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGS
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCEEEEEECCCCCCCC
VRLIEGLRPDSRQAADWSADSQRLLVSGSDAAGHAALFEVTPSSGKVVRLPVPQPRPLQA
EEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCEE
IHLPDPDQVLVLAAADDGHTFATLYDRRSSPWRALATLQDVSQVRLDRISGQVLLTRLSG
EECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
GGVWQVAPSLAADTLQAIDSKQPSRWRYRSWAPGAHGDLHYLSSTDTCSTYDGELRSVGG
CCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHH
QCLDAVKFTAINGFSVDQHDGALYVALAEEDGSSIAYMPLPQRSVASICVLANLLSILRK
HHHHHHHEEEECCCCEECCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
IAS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1370290; 7610040; 9278503 [H]