Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622501
Identifier: 84622501
GI number: 84622501
Start: 921748
End: 922185
Strand: Direct
Name: 84622501
Synonym: XOO_0844
Alternate gene names: NA
Gene position: 921748-922185 (Clockwise)
Preceding gene: 84622500
Following gene: 84622502
Centisome position: 18.66
GC content: 63.93
Gene sequence:
>438_bases ATGGGCACGCCTGGAAACTGGGATATCCAGCAGCACATGCTGGCACGCGTGGCCCAAGCGCTTGGGCCGGATCTGCTGCC GGACGTCGCCTTCGTCGGCGGCTGCACCACCGGTCTGCTGATGACAGACGCGGTCAGCCGGGAGGCTGTTCGCTTTACCG AAGACGTCGACCTGATCGTGCACGTCATGGGCTTGGGCAGTTGGTACCGCCTGCAGCAGTTACTGGCCGGTAAGGGCTTT CGCACCTCGCCCAACGACGACGTCGTCTGCCGTACCCGCTTGCGCGATCAACATGCCAGCGAGCTGATCGTCGATTTCAT GCCCGATGACGCTGCCGTCCTCGGATTCAGCAATCGCTGGTACGCCGATGCGCTGCGTGAGGCGTACGATCACGCACTGC CGACCAGTGTGACGATCCGCGTGGTCGCTCCGGCCTAG
Upstream 100 bases:
>100_bases ACGCCATGCTGGCGTTGGTGGACGCGATCCGGCTGGGGCGTGAGCGTGAGTCGGCGCTTGCCGGCAGTGTGCTGACCCAA TATCTGCGGGAGGTGCCGTA
Downstream 100 bases:
>100_bases GCCGACTCAAGTTCCAAGTGCAACACTTTTCTCCACTGCAGACCCGCGTTTTCTGTCAAAACACTGGCTCACGTAACTTT TGCACAATCAATGGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGTPGNWDIQQHMLARVAQALGPDLLPDVAFVGGCTTGLLMTDAVSREAVRFTEDVDLIVHVMGLGSWYRLQQLLAGKGF RTSPNDDVVCRTRLRDQHASELIVDFMPDDAAVLGFSNRWYADALREAYDHALPTSVTIRVVAPA
Sequences:
>Translated_145_residues MGTPGNWDIQQHMLARVAQALGPDLLPDVAFVGGCTTGLLMTDAVSREAVRFTEDVDLIVHVMGLGSWYRLQQLLAGKGF RTSPNDDVVCRTRLRDQHASELIVDFMPDDAAVLGFSNRWYADALREAYDHALPTSVTIRVVAPA >Mature_144_residues GTPGNWDIQQHMLARVAQALGPDLLPDVAFVGGCTTGLLMTDAVSREAVRFTEDVDLIVHVMGLGSWYRLQQLLAGKGFR TSPNDDVVCRTRLRDQHASELIVDFMPDDAAVLGFSNRWYADALREAYDHALPTSVTIRVVAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15925; Mature: 15794
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPGNWDIQQHMLARVAQALGPDLLPDVAFVGGCTTGLLMTDAVSREAVRFTEDVDLIV CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH HVMGLGSWYRLQQLLAGKGFRTSPNDDVVCRTRLRDQHASELIVDFMPDDAAVLGFSNRW HHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCCH YADALREAYDHALPTSVTIRVVAPA HHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure GTPGNWDIQQHMLARVAQALGPDLLPDVAFVGGCTTGLLMTDAVSREAVRFTEDVDLIV CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH HVMGLGSWYRLQQLLAGKGFRTSPNDDVVCRTRLRDQHASELIVDFMPDDAAVLGFSNRW HHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCCH YADALREAYDHALPTSVTIRVVAPA HHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA